RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 MARK4Q96L34 752 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 APBA2Q99767 749 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 VPS33BQ9H267 617 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 SEMA6AQ9H2E6 1030 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 ABI2Q9NYB9 513 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 PTGES3LE9PB15 166 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 MSX2P35548 267 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 RIOX2Q8IUF8 465 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 CALML6Q8TD86 181 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 PRDM12Q9H4Q4 367 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 PIF1Q9H611 641 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 HPS4Q9NQG7 708 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 TMEM161AQ9NX61 479 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 MYRFQ9Y2G1 1151 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 H0YC42 278 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 RABGGTBP53611 331 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 DCAF4L1Q3SXM0 396 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 SPATA6LQ8N4H0 392 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 OR6Y1Q8NGX8 325 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 NKD2Q969F2 451 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 TWNKQ96RR1 684 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 REXO4Q9GZR2 422 aaKnown RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 THAP1Q9NVV9 213 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 DDX43Q9NXZ2 648 aaKnown RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 STK39Q9UEW8 545 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 ATP8B3O60423 1300 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 AASDHQ4L235 1098 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 ST13P5Q8NFI4 369 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 CD101Q93033 1021 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 PCDH18Q9HCL0 1135 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 RABGEF1Q9UJ41 708 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 CFAP99D6REC4 459 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 TNPO2O14787 897 aaKnown RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 UGT1A9O60656 530 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 ASMTLO95671 621 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 USP17L7P0C7H9 530 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PSMB9P28065 219 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PKNOX1P55347 436 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PWP1Q13610 501 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PMF1Q6P1K2 205 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PIGZQ86VD9 579 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PHF21BQ96EK2 531 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 MCRS1Q96EZ8 462 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 CDRT15Q96T59 188 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 TBCBQ99426 244 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 MROH8Q9H579 483 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 ZNF395Q9H8N7 513 aaPredicted RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 UGT1A7Q9HAW7 530 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 UGT1A10Q9HAW8 530 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 UGT1A8Q9HAW9 530 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 XPNPEP3Q9NQH7 507 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 NMRK1Q9NWW6 199 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 FAM8A1Q9UBU6 413 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 CPA4Q9UI42 421 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 ATXN2Q99700 1313 aaKnown RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 E5RI56 91 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 MGRN1O60291 552 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 SUPT7LO94864 414 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 VAPBO95292 243 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 POMCP01189 267 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 CPB1P15086 417 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 VAV1P15498 845 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 RPL5P46777 297 aaKnown RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 LRRC74AQ0VAA2 488 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 CSHL1Q14406 222 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 MSS51Q4VC12 460 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 SPDYAQ5MJ70 313 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 NAPEPLDQ6IQ20 393 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 TDRD5Q8NAT2 981 aaKnown RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 KYQ8NBH2 561 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 BHMTQ93088 406 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 SERAC1Q96JX3 654 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 GPR20Q99678 358 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 DENND2DQ9H6A0 471 aaPredicted RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 MAFBQ9Y5Q3 323 aaPredicted RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PRR5-ARHGAP8B1AHC4 643 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 C2CD2LO14523 706 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 ARHGAP8P85298 464 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 ZNF235Q14590 738 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PDK3Q15120 406 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 TAF1CQ15572 869 aaPredicted RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 ARMC4Q5T2S8 1044 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 TRMT10BQ6PF06 316 aaKnown RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 PLD5Q8N7P1 536 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 SLC4A11Q8NBS3 891 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 THUMPD3Q9BV44 507 aaKnown RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 FICDQ9BVA6 458 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 ULBP1Q9BZM6 244 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 SAR1AQ9NR31 198 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 AAASQ9NRG9 546 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 SLC17A6Q9P2U8 582 aa12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 AFF4Q9UHB7 1163 aaKnown RBP12.79□□□□□ -0.36
SLC6A1-201ENST00000287766 ZNF180Q9UJW8 692 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms