RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ADGRD1Q6QNK2 874 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 PDZD4Q76G19 769 aaPredicted RBP21.5■■□□□ 1.03
YBX3-202ENST00000279550 GIPC2Q8TF65 315 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 MZB1Q8WU39 189 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 SAMD11Q96NU1 681 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 SIK2Q9H0K1 926 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 GMIPQ9P107 970 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 MAFFQ9ULX9 164 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 RAD54BQ9Y620 910 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 GBF1Q92538 1859 aa21.5■■□□□ 1.03
YBX3-202ENST00000279550 PRRG1O14668 218 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 PAGE1O75459 146 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 CSPG5O95196 566 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 ADH1AP07327 375 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 KRT15P19012 456 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 PTPN3P26045 913 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 YWHAQP27348 245 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 ELF1P32519 619 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 GALNT2Q10471 571 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 KBTBD12Q3ZCT8 623 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 BRMS1LQ5PSV4 323 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 PLPP4Q5VZY2 271 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 MON1AQ86VX9 555 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 TCEAL8Q8IYN2 117 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 LRRC34Q8IZ02 419 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 MRPL43Q8N983 215 aaKnown RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 CYTH2Q99418 400 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 GORASP1Q9BQQ3 440 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 PBX4Q9BYU1 374 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 ZMYND15Q9H091 742 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 COMMD8Q9NX08 183 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 ZC3H7BQ9UGR2 993 aaKnown RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 YIPF1Q9Y548 306 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 C2orf71A6NGG8 1288 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 HIDE1A8MVS5 230 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 MSH2P43246 934 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 ZNF135P52742 658 aaPredicted RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 ERVK-21P61565 698 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 PPIDQ08752 370 aaKnown RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 UNC5AQ6ZN44 842 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 C4orf33Q8N1A6 199 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 PDCD7Q8N8D1 485 aaKnown RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 GDAP1Q8TB36 358 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 CELF6Q96J87 481 aaKnown RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 KLHL5Q96PQ7 755 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 EMILIN2Q9BXX0 1053 aa21.49■■□□□ 1.03
YBX3-202ENST00000279550 XAB2Q9HCS7 855 aaKnown RBP21.49■■□□□ 1.03
YBX3-202ENST00000279550 CHD9Q3L8U1 2897 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 SLC38A8A6NNN8 435 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 EBAG9O00559 213 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 GRM6O15303 877 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 TGM5O43548 720 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 CPP00450 1065 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 SRGAP2BP0DMP2 458 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 ALDH1A3P47895 512 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 CAMK1Q14012 370 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 PARP6Q2NL67 630 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 MANEALQ5VSG8 457 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 FBXO32Q969P5 355 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 HAPLN3Q96S86 360 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 TTLL2Q9BWV7 592 aa21.48■■□□□ 1.03
YBX3-202ENST00000279550 CXorf49A8MYA2 514 aaPredicted RBP21.47■■□□□ 1.03
YBX3-202ENST00000279550 SPAG6O75602 509 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 TAF10Q12962 218 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 RWDD4Q6NW29 188 aaKnown RBP21.47■■□□□ 1.03
YBX3-202ENST00000279550 MSANTD2Q6P1R3 559 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 ARHGAP18Q8N392 663 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 SLC44A1Q8WWI5 657 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 LRRC39Q96DD0 335 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 EBNA1BP2Q99848 306 aaKnown RBP21.47■■□□□ 1.03
YBX3-202ENST00000279550 EIF2B3Q9NR50 452 aaKnown RBP21.47■■□□□ 1.03
YBX3-202ENST00000279550 SMYD2Q9NRG4 433 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 PIH1D1Q9NWS0 290 aaKnown RBP21.47■■□□□ 1.03
YBX3-202ENST00000279550 IGSF9Q9P2J2 1179 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 MAGED2Q9UNF1 606 aaPredicted RBP21.47■■□□□ 1.03
YBX3-202ENST00000279550 INSL5Q9Y5Q6 135 aa21.47■■□□□ 1.03
YBX3-202ENST00000279550 KCNU1A8MYU2 1149 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 CCR1P32246 355 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 GARSP41250 739 aaKnown RBP21.46■■□□□ 1.03
YBX3-202ENST00000279550 WDR4P57081 412 aaKnown RBP21.46■■□□□ 1.03
YBX3-202ENST00000279550 ZBTB17Q13105 803 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 SPARCL1Q14515 664 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 PPP2R5DQ14738 602 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 LILRA6Q6PI73 481 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 PID1Q7Z2X4 250 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 C14orf80Q86SX3 495 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 MICAL1Q8TDZ2 1067 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 DENND1AQ8TEH3 1009 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 CKAP2Q8WWK9 683 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 HDAC11Q96DB2 347 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 NKIRAS1Q9NYS0 192 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 MAD1L1Q9Y6D9 718 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 CEP290O15078 2479 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 CDH23Q9H251 3354 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 FAM47DPA6NHR8 397 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 H3BNC9 293 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 NCAM2O15394 837 aa21.46■■□□□ 1.03
YBX3-202ENST00000279550 PRPF4O43172 522 aaKnown RBP eCLIP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms