RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ENO1P06733 434 aaKnown RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 RFC2P35250 354 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 MATKP42679 507 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 AP2B1P63010 937 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 FRG1Q14331 258 aaKnown RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 CES4AQ5XG92 561 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 AAGABQ6PD74 315 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 PACS1Q6VY07 963 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 SPRED2Q7Z698 418 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 ADGRG6Q86SQ4 1221 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 OR6B3Q8NGW1 331 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 RILPQ96NA2 401 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 B3GNT5Q9BYG0 378 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 FAM49BQ9NUQ9 324 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 SLC4A7Q9Y6M7 1214 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 REV3LO60673 3130 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 PLIN3O60664 434 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 GNAT1P11488 350 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 ALOX15P16050 662 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 PNPLA4P41247 253 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 IRX1P78414 480 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 GRIK3Q13003 919 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 PDK1Q15118 436 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 SLC25A52Q3SY17 297 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 SLC27A1Q6PCB7 646 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 MYLK4Q86YV6 388 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 ULK2Q8IYT8 1036 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 DBF4BQ8NFT6 615 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 PPP4R1Q8TF05 950 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 NRG4Q8WWG1 115 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 ISL2Q96A47 359 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 ZNF184Q99676 751 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 DNAJC28Q9NX36 388 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 GDAP2Q9NXN4 497 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 IGSF9Q9P2J2 1179 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 UBQLN1Q9UMX0 589 aaKnown RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 APOBEC2Q9Y235 224 aaKnown RBP13.23□□□□□ -0.29
C9orf3-201ENST00000277198 WDR27A2RRH5 827 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 MAP3K6O95382 1288 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 ALDOAP04075 364 aaKnown RBP13.22□□□□□ -0.29
C9orf3-201ENST00000277198 LINGO3P0C6S8 592 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 GARSP41250 739 aaKnown RBP13.22□□□□□ -0.29
C9orf3-201ENST00000277198 SLC1A6P48664 564 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 SESN3P58005 492 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 WDR5P61964 334 aaKnown RBP13.22□□□□□ -0.29
C9orf3-201ENST00000277198 SOWAHAQ2M3V2 549 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 TEDDM1Q5T9Z0 273 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 TMCO4Q5TGY1 634 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 COLGALT1Q8NBJ5 622 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 TIFAQ96CG3 184 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 PPP1R16BQ96T49 567 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 C20orf27Q9GZN8 174 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 NKX2-4Q9H2Z4 354 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 DDX43Q9NXZ2 648 aaKnown RBP13.22□□□□□ -0.29
C9orf3-201ENST00000277198 ADAM28Q9UKQ2 775 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 FZD10Q9ULW2 581 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 NME7Q9Y5B8 376 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 RAD54BQ9Y620 910 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 PTPRSQ13332 1948 aa13.22□□□□□ -0.29
C9orf3-201ENST00000277198 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 PRR5-ARHGAP8B1AHC4 643 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 POLBP06746 335 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 ITGA2BP08514 1039 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 FGF3P11487 239 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CCDC130P13994 396 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 VAV1P15498 845 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 TFE3P19532 575 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CDC25CP30307 473 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 GRIA1P42261 906 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 AIF1P55008 147 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 ARHGAP8P85298 464 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 MGAT3Q09327 533 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 TUBB3Q13509 450 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 PDE1CQ14123 709 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 GRIN2CQ14957 1233 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CCDC153Q494R4 210 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 SPANXN3Q5MJ09 141 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 RABGAP1LQ5R372 815 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 N4BP2L1Q5TBK1 243 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 GRTP1Q5TC63 336 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 DENND5BQ6ZUT9 1274 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 ARNTL2Q8WYA1 636 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 NT5C3BQ969T7 300 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 ZNF560Q96MR9 790 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 ZMAT2Q96NC0 199 aaKnown RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 NR1H4Q96RI1 486 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CPNE1Q99829 537 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CCDC28BQ9BUN5 200 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 SLC7A8Q9UHI5 535 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 SCOCQ9UIL1 159 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 EMCNQ9ULC0 261 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 KAT6AQ92794 2004 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 GBF1Q92538 1859 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms