RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SAMD14Q8IZD0 417 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 OR13F1Q8NGS4 319 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 PDCD6IPQ8WUM4 868 aaKnown RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 CDRT15Q96T59 188 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 AGPAT1Q99943 283 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 EFHD1Q9BUP0 239 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 CCSER2Q9H7U1 834 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 ADPRHL2Q9NX46 363 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 SIRPGQ9P1W8 387 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 A0A1B0GUL6 1792 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 KIF13BQ9NQT8 1826 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 EVPLLA8MZ36 301 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 DNALI1O14645 258 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 IL18RAPO95256 599 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 RPL17P18621 184 aaKnown RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 RPS8P62241 208 aaKnown RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 CLVS2Q5SYC1 327 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 NEK8Q86SG6 692 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 RNF148Q8N7C7 305 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 TTLQ8NG68 377 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 FNIP1Q8TF40 1166 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 C1orf74Q96LT6 269 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 GLT1D1Q96MS3 346 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 DEPDC7Q96QD5 511 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 MMP19Q99542 508 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 CHID1Q9BWS9 393 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 C1QTNF7Q9BXJ2 289 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 SLC4A5Q9BY07 1137 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 ACSS3Q9H6R3 686 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 DNAJC28Q9NX36 388 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 DNMT3LQ9UJW3 386 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 SCAF8Q9UPN6 1271 aaKnown RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 MTMR7Q9Y216 660 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 CAB39Q9Y376 341 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 TCAF1Q9Y4C2 921 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 C12orf71A8MTZ7 269 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 TOR1BO14657 336 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 DDAH1O94760 285 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 MTA2O94776 668 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 COX4I1P13073 169 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 CD1EP15812 388 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ATF4P18848 351 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 RFC4P35249 363 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 GRIA1P42261 906 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 AP2S1P53680 142 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 METTL2BQ6P1Q9 378 aaKnown RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 KCNT2Q6UVM3 1135 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 NUDCD3Q8IVD9 361 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 LCORLQ8N3X6 602 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ZCCHC7Q8N3Z6 543 aaKnown RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 BPIFB6Q8NFQ5 453 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 LRTOMTQ8WZ04 291 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 PIK3R3Q92569 461 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ATP6V1E2Q96A05 226 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ASIC4Q96FT7 647 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 TOE1Q96GM8 510 aaKnown RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 MAGED4Q96JG8 741 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 VCPIP1Q96JH7 1222 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 SERPINI1Q99574 410 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ZSCAN5AQ9BUG6 496 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 RSPH9Q9H1X1 276 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 SERHL2Q9H4I8 314 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 PLSCR3Q9NRY6 295 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 IGSF5Q9NSI5 407 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 NHSQ6T4R5 1651 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 DOCK2Q92608 1830 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ZNF804BA4D1E1 1349 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 TOMM70O94826 608 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 EVI2BP34910 448 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 HSPA1LP34931 641 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 POLR2IP36954 125 aaKnown RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 SCN7AQ01118 1682 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 CACNB1Q02641 598 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 COX10Q12887 443 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 PIGGQ5H8A4 983 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 FSCBQ5H9T9 825 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ZCCHC23Q6ZST2 131 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 SNX32Q86XE0 403 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 TIAM2Q8IVF5 1701 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 TPH2Q8IWU9 490 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 GRPEL2Q8TAA5 225 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ZNF564Q8TBZ8 553 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 RAB2BQ8WUD1 216 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 DLG3Q92796 817 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 DACT3Q96B18 629 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-201ENST00000274071 CCDC120Q96HB5 630 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ZFYVE19Q96K21 471 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ZNF778Q96MU6 729 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 C17orf62Q9BQA9 187 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 TUBA1CQ9BQE3 449 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 RTKNQ9BST9 563 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 ANO3Q9BYT9 981 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 KCNN2Q9H2S1 579 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 TOR4AQ9NXH8 423 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 IL20Q9NYY1 176 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 KCND2Q9NZV8 630 aa9.4□□□□□ -0.9
PDGFC-201ENST00000274071 VPS4AQ9UN37 437 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms