RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 LCP1P13796 627 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 MAGEA3P43357 314 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 AP3M2P53677 418 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 C16orf72Q14CZ0 275 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 LY6KQ17RY6 165 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF423Q2M1K9 1284 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 PPP1R26Q5T8A7 1209 aaPredicted RBP13.2□□□□□ -0.3
COL8A1-202ENST00000273342 FSTL4Q6MZW2 842 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 TSPAN14Q8NG11 270 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 DIS3LQ8TF46 1054 aaKnown RBP13.2□□□□□ -0.3
COL8A1-202ENST00000273342 KBTBD7Q8WVZ9 684 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 HTR3CQ8WXA8 447 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 LRTOMTQ8WZ04 291 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 PPWD1Q96BP3 646 aaKnown RBP13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CPB2Q96IY4 423 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 COQ10BQ9H8M1 238 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 MTMR10Q9NXD2 777 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 UBP1Q9NZI7 540 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 SLC39A10Q9ULF5 831 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 LRRC37AA6NMS7 1700 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 PLOD2O00469 737 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 MAFGO15525 162 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 FUT4P22083 530 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 HARS2P49590 506 aaKnown RBP13.19□□□□□ -0.3
COL8A1-202ENST00000273342 SERPINB8P50452 374 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 PSMD7P51665 324 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 MAPK10P53779 464 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 CDK18Q07002 472 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 NIPAL4Q0D2K0 466 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 PDK2Q15119 407 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 ZBTB8OSQ8IWT0 167 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 PDCD6IPQ8WUM4 868 aaKnown RBP13.19□□□□□ -0.3
COL8A1-202ENST00000273342 MFSD3Q96ES6 412 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 HPDLQ96IR7 371 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 FRMD8Q9BZ67 464 aaPredicted RBP13.19□□□□□ -0.3
COL8A1-202ENST00000273342 TASP1Q9H6P5 420 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 EPS15L1Q9UBC2 864 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 DOLKQ9UPQ8 538 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 PCDHB12Q9Y5F1 795 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 CEPT1Q9Y6K0 416 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 GPR25O00155 361 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 RNF103O00237 685 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 STAMBPO95630 424 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 CKMT2P17540 419 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 EMP3P54852 163 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF460Q14592 562 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 ARL13AQ5H913 290 aaPredicted RBP13.19□□□□□ -0.3
COL8A1-202ENST00000273342 NBPF12Q5TAG4 269 aaPredicted RBP13.19□□□□□ -0.3
COL8A1-202ENST00000273342 TIFABQ6ZNK6 161 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 FAM110BQ8TC76 370 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 PLEKHG4BQ96PX9 1271 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 TMEM79Q9BSE2 394 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 TMEM134Q9H6X4 195 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 NRBP2Q9NSY0 501 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
COL8A1-202ENST00000273342 AP4E1Q9UPM8 1137 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 KIAA1217Q5T5P2 1943 aa13.19□□□□□ -0.3
COL8A1-202ENST00000273342 ARHGEF37A1IGU5 675 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 RGSL1A5PLK6 1076 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ENTPD1P49961 510 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 CXCL9Q07325 125 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ANKDD1AQ495B1 522 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 GK5Q6ZS86 529 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 RPS27LQ71UM5 84 aaKnown RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 PID1Q7Z2X4 250 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 RTP4Q96DX8 246 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ZFRQ96KR1 1074 aaKnown RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ZDHHC2Q9UIJ5 367 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 RAB26Q9ULW5 256 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 RNF11Q9Y3C5 154 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ANKRD31Q8N7Z5 1873 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 BPTFQ12830 3046 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 PDLIM1O00151 329 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 AP1G1O43747 822 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 GCATO75600 419 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ATP5BP06576 529 aaKnown RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 C2P06681 752 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 UBA1P22314 1058 aaKnown RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ME2P23368 584 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 EPHX2P34913 555 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 CCR3P51677 355 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 NR1H2P55055 460 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 DBN1Q16643 649 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 MPZL3Q6UWV2 235 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 C16orf89Q6UX73 402 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 NIM1KQ8IY84 436 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 CERS2Q96G23 380 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 CSPG4P5Q96PW8 444 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms