RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CREB3O43889 395 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 PDGFRBP09619 1106 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 SAT1P21673 171 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 ARL4AP40617 200 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 CCDC153Q494R4 210 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 NADK2Q4G0N4 442 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 FBXO16Q8IX29 292 aaPredicted RBP28.1■■■□□ 2.09
CBX4-201ENST00000269397 ZNF567Q8N184 647 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 GATA5Q9BWX5 397 aaPredicted RBP28.1■■■□□ 2.09
CBX4-201ENST00000269397 DDX18Q9NVP1 670 aaKnown RBP28.1■■■□□ 2.09
CBX4-201ENST00000269397 USP3Q9Y6I4 520 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 ZNF638Q14966 1978 aaKnown RBP28.1■■■□□ 2.09
CBX4-201ENST00000269397 PITX1P78337 314 aaPredicted RBP28.1■■■□□ 2.09
CBX4-201ENST00000269397 HSP90AA5PQ58FG0 334 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 POTEAQ6S8J7 498 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 PIP4K2CQ8TBX8 421 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 DGCR14Q96DF8 476 aaKnown RBP28.1■■■□□ 2.09
CBX4-201ENST00000269397 RBBP8Q99708 897 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 CPNE1Q99829 537 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 C11orf84Q9BUA3 381 aaPredicted RBP28.1■■■□□ 2.09
CBX4-201ENST00000269397 AKT3Q9Y243 479 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 AP4B1Q9Y6B7 739 aa28.1■■■□□ 2.09
CBX4-201ENST00000269397 ENO3P13929 434 aaPredicted RBP28.09■■■□□ 2.09
CBX4-201ENST00000269397 GLDCP23378 1020 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 MS4A2Q01362 244 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 ITGA7Q13683 1181 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 MAP7Q14244 749 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 C6orf52Q5T4I8 152 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 MARVELD2Q8N4S9 558 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 RCN3Q96D15 328 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 CCDC78A2IDD5 438 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 TCN1P20061 433 aaPredicted RBP28.09■■■□□ 2.09
CBX4-201ENST00000269397 PTPN9P43378 593 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 TNFAIP2Q03169 654 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 GRTP1Q5TC63 336 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 LBX2Q6XYB7 198 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 PLPPR4Q7Z2D5 763 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 PID1Q7Z2X4 250 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 LILRA2Q8N149 483 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 NUF2Q9BZD4 464 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 PRDM12Q9H4Q4 367 aa28.09■■■□□ 2.09
CBX4-201ENST00000269397 C6orf203Q9P0P8 240 aaPredicted RBP28.09■■■□□ 2.09
CBX4-201ENST00000269397 PRDX6P30041 224 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 LSM12Q3MHD2 195 aaKnown RBP28.08■■■□□ 2.09
CBX4-201ENST00000269397 TBC1D25Q3MII6 688 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 PABPC1LQ4VXU2 614 aaKnown RBP28.08■■■□□ 2.09
CBX4-201ENST00000269397 KYQ8NBH2 561 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 DTNBP1Q96EV8 351 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 VPS33BQ9H267 617 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 ATXN10Q9UBB4 475 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 SRGAP2BP0DMP2 458 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 SERPINB8P50452 374 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 KLHDC10Q6PID8 442 aa28.08■■■□□ 2.09
CBX4-201ENST00000269397 BHLHE22Q8NFJ8 381 aaPredicted RBP28.08■■■□□ 2.09
CBX4-201ENST00000269397 CENPIQ92674 756 aaPredicted RBP28.08■■■□□ 2.09
CBX4-201ENST00000269397 PRPF18Q99633 342 aaKnown RBP28.08■■■□□ 2.09
CBX4-201ENST00000269397 ZNF487B1APH4 448 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 TK2O00142 265 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 DENRO43583 198 aaKnown RBP28.07■■■□□ 2.08
CBX4-201ENST00000269397 AP1G1O43747 822 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 TRIM13O60858 407 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 ASLP04424 464 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 ACAT1P24752 427 aaKnown RBP28.07■■■□□ 2.08
CBX4-201ENST00000269397 RPL5P46777 297 aaKnown RBP28.07■■■□□ 2.08
CBX4-201ENST00000269397 IFRD2Q12894 506 aaPredicted RBP28.07■■■□□ 2.08
CBX4-201ENST00000269397 FAM156AQ8NDB6 213 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 KLRG1Q96E93 195 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 MFSD3Q96ES6 412 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 CATSPER2Q96P56 530 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 APOL2Q9BQE5 337 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 BPTFQ12830 3046 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 C2P06681 752 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 THRAP10827 490 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 MYBPC1Q00872 1141 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 PPP2R5DQ14738 602 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 RARS2Q5T160 578 aaKnown RBP28.07■■■□□ 2.08
CBX4-201ENST00000269397 NXNQ6DKJ4 435 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 EXOC8Q8IYI6 725 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 NMRAL1Q9HBL8 299 aa28.07■■■□□ 2.08
CBX4-201ENST00000269397 C22orf31O95567 290 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 JUNP05412 331 aaKnown RBP28.06■■■□□ 2.08
CBX4-201ENST00000269397 SPRP35270 261 aaPredicted RBP28.06■■■□□ 2.08
CBX4-201ENST00000269397 DPP6P42658 865 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 GLRBP48167 497 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 CEACAM7Q14002 265 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 BNC2Q6ZN30 1099 aaPredicted RBP28.06■■■□□ 2.08
CBX4-201ENST00000269397 FAM149B1Q96BN6 582 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 FERMT1Q9BQL6 677 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 hCG_2014768A0A024R1R8 64 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 ATP9BO43861 1147 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 LIMK2P53671 638 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 CDKL1Q00532 357 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 NAB1Q13506 487 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 GLRA4Q5JXX5 417 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 GJC2Q5T442 439 aaPredicted RBP28.06■■■□□ 2.08
CBX4-201ENST00000269397 DNAAF3Q8N9W5 541 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 URGCPQ8TCY9 931 aa28.06■■■□□ 2.08
CBX4-201ENST00000269397 ILKAPQ9H0C8 392 aaPredicted RBP28.06■■■□□ 2.08
CBX4-201ENST00000269397 GNEQ9Y223 722 aaKnown RBP28.06■■■□□ 2.08
CBX4-201ENST00000269397 RGSL1A5PLK6 1076 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms