RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 SH2D4BQ5SQS7 431 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 HP1BP3Q5SSJ5 553 aaPredicted RBP12.96□□□□□ -0.33
PRPF6-201ENST00000266079 LIN9Q5TKA1 542 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 ZNF280DQ6N043 979 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 DNAJC24Q6P3W2 148 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 RIPOR1Q6ZS17 1223 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 TTC7BQ86TV6 843 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.33
PRPF6-201ENST00000266079 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 LZICQ8WZA0 190 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 HERVK_113Q902F9 699 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 SMOQ99835 787 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 EBF3Q9H4W6 596 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 SPG21Q9NZD8 308 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 COL4A6Q14031 1691 aa12.96□□□□□ -0.33
PRPF6-201ENST00000266079 ALOX15BO15296 676 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 TM9SF1O15321 606 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 FGF18O76093 207 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 LSM8O95777 96 aaKnown RBP12.96□□□□□ -0.34
PRPF6-201ENST00000266079 BAG2O95816 211 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 CA3P07451 260 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 ITGA2BP08514 1039 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 PIM1P11309 404 aaPredicted RBP12.96□□□□□ -0.34
PRPF6-201ENST00000266079 NPR3P17342 541 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 TYMPP19971 482 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 GRIK1P39086 918 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 ACTR3P61158 418 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 ADIGQ0VDE8 80 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 USP41Q3LFD5 358 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 EFHC2Q5JST6 749 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 JOSD2Q8TAC2 188 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 SLC35F5Q8WV83 523 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 OXNAD1Q96HP4 312 aaPredicted RBP12.96□□□□□ -0.34
PRPF6-201ENST00000266079 PANX3Q96QZ0 392 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 TTC1Q99614 292 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 RAD9AQ99638 391 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 SEPT5Q99719 369 aaPredicted RBP12.96□□□□□ -0.34
PRPF6-201ENST00000266079 HNRNPABQ99729 332 aaKnown RBP12.96□□□□□ -0.34
PRPF6-201ENST00000266079 PCDHB12Q9Y5F1 795 aa12.96□□□□□ -0.34
PRPF6-201ENST00000266079 SMIM31A0A1B0GVY4 71 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 BUD23O43709 281 aaKnown RBP12.95□□□□□ -0.34
PRPF6-201ENST00000266079 ATP9BO43861 1147 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 OPHN1O60890 802 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 DLDP09622 509 aaKnown RBP12.95□□□□□ -0.34
PRPF6-201ENST00000266079 FAM163BP0C2L3 166 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 LAG3P18627 525 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 FGFR3P22607 806 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 CPA2P48052 419 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 ARL4CP56559 192 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 MAMLD1Q13495 774 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 PSMD5Q16401 504 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 ARHGAP17Q68EM7 881 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 FAM183BPQ6ZVS7 135 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 PHF13Q86YI8 300 aaPredicted RBP12.95□□□□□ -0.34
PRPF6-201ENST00000266079 ZMIZ2Q8NF64 920 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 FAM149B1Q96BN6 582 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 LHX5Q9H2C1 402 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 GPAMQ9HCL2 828 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 ZDHHC7Q9NXF8 308 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 HSFX1Q9UBD0 423 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 CIDEBQ9UHD4 219 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 PTPRSQ13332 1948 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 SYN3O14994 580 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 HNRNPRO43390 633 aaKnown RBP12.95□□□□□ -0.34
PRPF6-201ENST00000266079 OAZ2O95190 189 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 RFC1P35251 1148 aaPredicted RBP12.95□□□□□ -0.34
PRPF6-201ENST00000266079 GRIA2P42262 883 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 CDO1Q16878 200 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 PKDCCQ504Y2 493 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 TMCO4Q5TGY1 634 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 RNF19BQ6ZMZ0 732 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 SCAMP5Q8TAC9 235 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 DUSP16Q9BY84 665 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 MTIF3Q9H2K0 278 aaKnown RBP12.95□□□□□ -0.34
PRPF6-201ENST00000266079 CRISPLD1Q9H336 500 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 C12orf65Q9H3J6 166 aaKnown RBP12.95□□□□□ -0.34
PRPF6-201ENST00000266079 LRRC4Q9HBW1 653 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 NDUFA13Q9P0J0 144 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 SLC17A7Q9P2U7 560 aa12.95□□□□□ -0.34
PRPF6-201ENST00000266079 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.95□□□□□ -0.34
PRPF6-201ENST00000266079 LTBP2Q14767 1821 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 PAPSS1O43252 624 aaPredicted RBP12.94□□□□□ -0.34
PRPF6-201ENST00000266079 TM7SF2O76062 418 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 TMCC1O94876 653 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 CCDC166P0CW27 439 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 DESP17661 470 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 GEMIN4P57678 1058 aaKnown RBP12.94□□□□□ -0.34
PRPF6-201ENST00000266079 DUSP4Q13115 394 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 MGAT5BQ3V5L5 792 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 TMC7Q7Z402 723 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 XYLT1Q86Y38 959 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 ZBED8Q8IZ13 594 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 BANPQ8N9N5 519 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 CYTH2Q99418 400 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 EPB41L1Q9H4G0 881 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 ARMCX1Q9P291 453 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 ZNF510Q9Y2H8 683 aa12.94□□□□□ -0.34
PRPF6-201ENST00000266079 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms