RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 GATA5Q9BWX5 397 aaPredicted RBP17.18■□□□□ 0.34
SQLE-201ENST00000265896 SPATA16Q9BXB7 569 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 RHOBTB2Q9BYZ6 727 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 RBPJLQ9UBG7 517 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 PTPRFP10586 1907 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 MDM4O15151 490 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 BIRC5O15392 142 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 C2P06681 752 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 RXRBP28702 533 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 PLK1P53350 603 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 NRF1Q16656 503 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 ARCQ7LC44 396 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 CATSPER4Q7RTX7 472 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 PIGVQ9NUD9 493 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.17■□□□□ 0.34
SQLE-201ENST00000265896 CSADQ9Y600 493 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 POLBP06746 335 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 RPL10P27635 214 aaKnown RBP17.17■□□□□ 0.34
SQLE-201ENST00000265896 PMLP29590 882 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 CTBP1Q13363 440 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 PDK1Q15118 436 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 PKDCCQ504Y2 493 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 PCDH20Q8N6Y1 951 aaKnown RBP17.17■□□□□ 0.34
SQLE-201ENST00000265896 GRIP2Q9C0E4 1043 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 ASB7Q9H672 318 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 CYP4F12Q9HCS2 524 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 TLL2Q9Y6L7 1015 aa17.17■□□□□ 0.34
SQLE-201ENST00000265896 CNMDO75829 334 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 KLHL2O95198 593 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 CDK7P50613 346 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 MAP3K7CLP57077 242 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 MS4A2Q01362 244 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 TMCO4Q5TGY1 634 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 OTOP3Q7RTS5 596 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 PLPPR4Q7Z2D5 763 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 SPATA22Q8NHS9 363 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 RNF217Q8TC41 542 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 KCTD4Q8WVF5 259 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 KCNK16Q96T55 309 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 TCF7L2Q9NQB0 619 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 UBAP1Q9NZ09 502 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 PDP2Q9P2J9 529 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 HEMK1Q9Y5R4 338 aaPredicted RBP17.16■□□□□ 0.34
SQLE-201ENST00000265896 RECQL4O94761 1208 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 PGAM1P18669 254 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 TPSB2P20231 275 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 NMBRP28336 390 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 ATICP31939 592 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 TPSAB1Q15661 275 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 CMPK2Q5EBM0 449 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 FBXW8Q8N3Y1 598 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 NPWQ8N729 165 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 LRRC39Q96DD0 335 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 FTHL17Q9BXU8 183 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 GMPR2Q9P2T1 348 aaKnown RBP17.16■□□□□ 0.34
SQLE-201ENST00000265896 DCDC2Q9UHG0 476 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 ITGA11Q9UKX5 1188 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 VANGL2Q9ULK5 521 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 ZNF638Q14966 1978 aaKnown RBP17.16■□□□□ 0.34
SQLE-201ENST00000265896 H3BNX3 289 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 PIGNO95427 931 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 SRGAP2BP0DMP2 458 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 HNRNPLP14866 589 aaKnown RBP eCLIP17.16■□□□□ 0.348e-7■□□□□ 10.1
SQLE-201ENST00000265896 DESP17661 470 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 C11orf91Q3C1V1 193 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 LSM12Q3MHD2 195 aaKnown RBP17.16■□□□□ 0.34
SQLE-201ENST00000265896 ARL13AQ5H913 290 aaPredicted RBP17.16■□□□□ 0.34
SQLE-201ENST00000265896 MARK2Q7KZI7 788 aaKnown RBP17.16■□□□□ 0.34
SQLE-201ENST00000265896 DENND6AQ8IWF6 608 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 ST13P4Q8IZP2 240 aaPredicted RBP17.16■□□□□ 0.34
SQLE-201ENST00000265896 CMTM5Q96DZ9 223 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 ZDHHC2Q9UIJ5 367 aa17.16■□□□□ 0.34
SQLE-201ENST00000265896 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 C15orf38-AP3S2A0A0A6YYH1 394 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 C9JVG2 144 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 NRP1O14786 923 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 DDNO94850 711 aaPredicted RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 GSTA2P09210 222 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 UQCRBP14927 111 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 GP5P40197 560 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 DPP6P42658 865 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 ALDH1A3P47895 512 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 CXCR3P49682 368 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 SOX4Q06945 474 aaPredicted RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 GRM3Q14832 879 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 POU6F1Q14863 301 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 CYTH1Q15438 398 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 LRRC8BQ6P9F7 803 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 ARMCX2Q7L311 632 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 ARPINQ7Z6K5 226 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 ICA1LQ8NDH6 482 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 TTC16Q8NEE8 873 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 MED10Q9BTT4 135 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 DTNAQ9Y4J8 743 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 SF3B1O75533 1304 aaKnown RBP eCLIP17.15■□□□□ 0.341e-6■■■■■ 142.6
SQLE-201ENST00000265896 EEF2KO00418 725 aaKnown RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 MT-CYBP00156 380 aaPredicted RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 MX2P20592 715 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 NME5P56597 212 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms