RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CNOT1A5YKK6 2376 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 THADAQ6YHU6 1953 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 K7ESF4 209 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 BUB1O43683 1085 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 MAP3K6O95382 1288 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 EPHX1P07099 455 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 CD48P09326 243 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 DESP17661 470 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 CYLC1P35663 651 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 NOP2P46087 812 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 TAS2R40P59535 323 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 TPI1P60174 286 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 ZNF177Q13360 481 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 SPA17Q15506 151 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 CRY1Q16526 586 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 PTPRNQ16849 979 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 AHI1Q8N157 1196 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 PGBD3Q8N328 593 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 FAM160A2Q8N612 972 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 FRMD1Q8N878 549 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 TSTD1Q8NFU3 115 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 FIBINQ8TAL6 211 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 RLN3Q8WXF3 142 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 RFFLQ8WZ73 363 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 ATOH1Q92858 354 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 ACDQ96AP0 544 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 CELF6Q96J87 481 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 HAPLN3Q96S86 360 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 SPON2Q9BUD6 331 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 ZYG11BQ9C0D3 744 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 BCCIPQ9P287 314 aaKnown RBP eCLIP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 SLCO3A1Q9UIG8 710 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 SALL4Q9UJQ4 1053 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 MMP17Q9ULZ9 603 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 PCDHA13Q9Y5I0 950 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 EPN1Q9Y6I3 576 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 STON1Q9Y6Q2 735 aa7.45□□□□□ -1.22
DEPDC1B-201ENST00000265036 GOLGA6L6A8MZA4 724 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 CBX4O00257 560 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 DCLK1O15075 740 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 CLDN11O75508 207 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 IPO7O95373 1038 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 SP9P0CG40 484 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 POLR2EP19388 210 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 NTSR1P30989 418 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 ACVRL1P37023 503 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 DGKEP52429 567 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 SLC25A11Q02978 314 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 FAM182AQ5T1J6 154 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 MPP7Q5T2T1 576 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 MANEALQ5VSG8 457 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 NUDT18Q6ZVK8 323 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 FNIP1Q8TF40 1166 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 NTAN1Q96AB6 310 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 TBC1D31Q96DN5 1066 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 LACRTQ9GZZ8 138 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 PRMT8Q9NR22 394 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 IP6K2Q9UHH9 426 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 PI4KAP42356 2102 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 DOCK9Q9BZ29 2069 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 RALGAPA1Q6GYQ0 2036 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 IGLV3-10A0A075B6K4 115 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 A0A1W2PQF6 199 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 MACROD2A1Z1Q3 448 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 TTC34A8MYJ7 566 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 K7ERQ8 282 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 EEF2KO00418 725 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 PROSCO94903 275 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 MT-CO1P00395 513 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 DLDP09622 509 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 RARAP10276 462 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 TNFRSF4P43489 277 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 CDH4P55283 916 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 SCAPQ12770 1279 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 MMRN1Q13201 1228 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 POM121L1PQ3SYA9 428 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 ERMARDQ5T6L9 678 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 TTC39BQ5VTQ0 682 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 RNF43Q68DV7 783 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 SYT13Q7L8C5 426 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 TMTC1Q8IUR5 882 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 TP53INP2Q8IXH6 220 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 SYNPOQ8N3V7 929 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 UCMAQ8WVF2 138 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 LMLNQ96KR4 655 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 EPAS1Q99814 870 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 FEM1AQ9BSK4 669 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 SLC2A11Q9BYW1 496 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 MKRN2Q9H000 416 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 KIAA1522Q9P206 1035 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 IMPACTQ9P2X3 320 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 UVRAGQ9P2Y5 699 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 ZNF212Q9UDV6 495 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 PLA2G4CQ9UP65 541 aa7.44□□□□□ -1.22
DEPDC1B-201ENST00000265036 BUB1BO60566 1050 aaPredicted RBP7.43□□□□□ -1.22
DEPDC1B-201ENST00000265036 FECHP22830 423 aa7.43□□□□□ -1.22
DEPDC1B-201ENST00000265036 MARCKSL1P49006 195 aa7.43□□□□□ -1.22
DEPDC1B-201ENST00000265036 DNA2P51530 1060 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms