RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 TGDSO95455 350 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 EIF2AK2P19525 551 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 ADORA2BP29275 332 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 GALNTL6Q49A17 601 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 OAFQ86UD1 273 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 RASGRP4Q8TDF6 673 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 EIF2AK1Q9BQI3 630 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 TMEM117Q9H0C3 514 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 C12orf4Q9NQ89 552 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 LIMD1Q9UGP4 676 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 GLS2Q9UI32 602 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 SNX7Q9UNH6 387 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 PCDHA3Q9Y5H8 950 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 METP08581 1390 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 PPEF2O14830 753 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 PLA2G6O60733 806 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 DGKIO75912 1065 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 PRKCBP05771 671 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 MPP2Q14168 576 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 PDK3Q15120 406 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 RHEBQ15382 184 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 TAF13Q15543 124 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 PKN1Q16512 942 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 MEA1Q16626 185 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 PYDC2Q56P42 97 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 ACAD10Q6JQN1 1059 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 ZNF549Q6P9A3 640 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 TRIM40Q6P9F5 258 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 RFKQ969G6 155 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.55□□□□□ -1.52
XRN1-201ENST00000264951 ASTN2O75129 1339 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 NPHP3-ACAD11A0A0J9YXS1 232 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 KHDRBS3O75525 346 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 RPL10AP62906 217 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 NFE2Q16621 373 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 GLRA4Q5JXX5 417 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 LCN1P1Q5VSP4 162 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 DNAJC10Q8IXB1 793 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 SIX5Q8N196 739 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 NKAPQ8N5F7 415 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 FBXO36Q8NEA4 188 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 TSPAN18Q96SJ8 248 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 DHX33Q9H6R0 707 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 SAE1Q9UBE0 346 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 SEC14L4Q9UDX3 406 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 ABCG2Q9UNQ0 655 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 GMPPBQ9Y5P6 360 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 CLDN25C9JDP6 229 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 PPEF1O14829 653 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 IDO1P14902 403 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 POLD2P49005 469 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 CACNB1Q02641 598 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 C6orf52Q5T4I8 152 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 KLHDC7AQ5VTJ3 777 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 MFSD14CQ5VZR4 134 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 IL31Q6EBC2 164 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 ZNF746Q6NUN9 644 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 USP17L2Q6R6M4 530 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 FAM20CQ8IXL6 584 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 DPF3Q92784 378 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 CCDC115Q96NT0 180 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 NDNQ99608 321 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 FAM49AQ9H0Q0 323 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 SLC6A15Q9H2J7 730 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 SRP68Q9UHB9 627 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 MTF2Q9Y483 593 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 F8A1P23610 371 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 SLC1A6P48664 564 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 DRG2P55039 364 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 PWP1Q13610 501 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 C12orf56Q8IXR9 622 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 HOPXQ9BPY8 73 aaPredicted RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 CCDC3Q9BQI4 270 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 CDC42EP4Q9H3Q1 356 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 INTS7Q9NVH2 962 aaKnown RBP5.55□□□□□ -1.52
XRN1-201ENST00000264951 PCDHGB1Q9Y5G3 927 aa5.55□□□□□ -1.52
XRN1-201ENST00000264951 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 FAM86C2PA6NEL3 165 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 H7C2Y5 167 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 CAMTA2O94983 1202 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 PAX7P23759 505 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 FXR2P51116 673 aaKnown RBP eCLIP5.54□□□□□ -1.52
XRN1-201ENST00000264951 BCAT1P54687 386 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 UGT2B15P54855 530 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 ACSM2AQ08AH3 577 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 ST3GAL1Q11201 340 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 ILF3Q12906 894 aaKnown RBP eCLIP5.54□□□□□ -1.52
XRN1-201ENST00000264951 PRKG2Q13237 762 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 ZNF177Q13360 481 aaPredicted RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 ACSM2BQ68CK6 577 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 RETSATQ6NUM9 610 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 AGMOQ6ZNB7 445 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 RIPOR1Q6ZS17 1223 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 APOBEC3FQ8IUX4 373 aaKnown RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 PHF10Q8WUB8 498 aaKnown RBP5.54□□□□□ -1.52
XRN1-201ENST00000264951 GRIP2Q9C0E4 1043 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 C14orf105Q9NVL8 296 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 PLCL2Q9UPR0 1127 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 LOC100506127A0A0U1RQW1 187 aa5.54□□□□□ -1.52
XRN1-201ENST00000264951 USP17L3A6NCW0 530 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms