RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 OR52K1Q8NGK4 314 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 GORASP1Q9BQQ3 440 aa16.65■□□□□ 0.26
CTCF-201ENST00000264010 AAR2Q9Y312 384 aaKnown RBP16.65■□□□□ 0.26
CTCF-201ENST00000264010 CCDC78A2IDD5 438 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 KRT16P08779 473 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 LRPAP1P30533 357 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 CLCNKBP51801 687 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 DAOAP59103 153 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 RPL10AP62906 217 aaKnown RBP16.64■□□□□ 0.26
CTCF-201ENST00000264010 ANO4Q32M45 955 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 PKDCCQ504Y2 493 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 RABGAP1LQ5R372 815 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 NXNQ6DKJ4 435 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 IPMKQ8NFU5 416 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 RTP4Q96DX8 246 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 NR1H4Q96RI1 486 aaPredicted RBP16.64■□□□□ 0.26
CTCF-201ENST00000264010 CPNE1Q99829 537 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 ADAM2Q99965 735 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 THAP1Q9NVV9 213 aa16.64■□□□□ 0.26
CTCF-201ENST00000264010 E2F8A0AVK6 867 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 MYBPHLA2RUH7 354 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 DPPA5A6NC42 116 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 B2RBV5 119 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 FCHO1O14526 889 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 MGRN1O60291 552 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 USP12O75317 370 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 GCAP28676 217 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 ARL1P40616 181 aaPredicted RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 KDSRQ06136 332 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 SOX4Q06945 474 aaPredicted RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 BST1Q10588 318 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 RIPK1Q13546 671 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 FSCBQ5H9T9 825 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 TMEM40Q8WWA1 233 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 OXNAD1Q96HP4 312 aaPredicted RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 LRFN2Q9ULH4 789 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 A8MUI8 341 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 AHCYL1O43865 530 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 TMCC1O94876 653 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 GRK2P25098 689 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 PCSK9Q8NBP7 692 aaKnown RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 CYP4F11Q9HBI6 524 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 ABI2Q9NYB9 513 aaPredicted RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 KCNK4Q9NYG8 393 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 HOXD8P13378 290 aaPredicted RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 TKTP29401 623 aaKnown RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 CYP2C18P33260 490 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 USP10Q14694 798 aaKnown RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 RGMBQ6NW40 437 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 CAND1Q86VP6 1230 aaKnown RBP16.64■□□□□ 0.25
CTCF-201ENST00000264010 TEX9Q8N6V9 391 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 PCED1BQ96HM7 432 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 CHKBQ9Y259 395 aa16.64■□□□□ 0.25
CTCF-201ENST00000264010 TADA2AO75478 443 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 ERVK-10P10266 1014 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 PAX3P23760 479 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 GSTT1P30711 240 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 CD52P31358 61 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 CCR1P32246 355 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 OR1G1P47890 313 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 SLC18A2Q05940 514 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 MPP3Q13368 585 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 SYPL2Q5VXT5 272 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 TRMT10BQ6PF06 316 aaKnown RBP16.63■□□□□ 0.25
CTCF-201ENST00000264010 BBS5Q8N3I7 341 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 RFWD2Q8NHY2 731 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 CERS2Q96G23 380 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 COLEC11Q9BWP8 271 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 KATNBL1Q9H079 304 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 EIF2B3Q9NR50 452 aaKnown RBP16.63■□□□□ 0.25
CTCF-201ENST00000264010 UBP1Q9NZI7 540 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 KLHL2O95198 593 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 ZNF865P0CJ78 1059 aaPredicted RBP16.63■□□□□ 0.25
CTCF-201ENST00000264010 IL4RP24394 825 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 GEMP55040 296 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 CACNB2Q08289 660 aaPredicted RBP16.63■□□□□ 0.25
CTCF-201ENST00000264010 CDH17Q12864 832 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 PACS1Q6VY07 963 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 SLC26A7Q8TE54 656 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 SYBUQ9NX95 663 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 SLC39A10Q9ULF5 831 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 CCDC189A1A4V9 331 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 KLHL33A6NCF5 533 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 YJEFN3A6XGL0 299 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 E7ENQ6 273 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 BIRC5O15392 142 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 TGDSO95455 350 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 OAS1P00973 400 aaKnown RBP16.63■□□□□ 0.25
CTCF-201ENST00000264010 PRKCHP24723 683 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 CRHR1P34998 444 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 PURAQ00577 322 aaKnown RBP16.63■□□□□ 0.25
CTCF-201ENST00000264010 YWHAHQ04917 246 aaPredicted RBP16.63■□□□□ 0.25
CTCF-201ENST00000264010 TBCCQ15814 346 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 C16orf46Q6P387 395 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 KIAA2013Q8IYS2 634 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 C10orf82Q8WW14 230 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 NPY6RQ99463 290 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 PRKAG3Q9UGI9 489 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms