RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 GOLGA2P5Q9HBQ8 144 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 CDY2AQ9Y6F7 541 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 CDY1Q9Y6F8 540 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 M0QYT0 321 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 CLDN5O00501 218 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 CSPG5O95196 566 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 ZFXP17010 805 aaPredicted RBP12.67□□□□□ -0.38
CHMP3-201ENST00000263856 PIK3R1P27986 724 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 NAGLUP54802 743 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 NIPAL4Q0D2K0 466 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 ADIGQ0VDE8 80 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 TMC7Q7Z402 723 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 RNF135Q8IUD6 432 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 PQLC1Q8N2U9 271 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 CEP70Q8NHQ1 597 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 OPTNQ96CV9 577 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 KLRG1Q96E93 195 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 MKS1Q9NXB0 559 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 NME7Q9Y5B8 376 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 HBP1O60381 514 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 PIGNO95427 931 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 FDFT1P37268 417 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 MAGEA3P43357 314 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 NUMBP49757 651 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 PDK1Q15118 436 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 FAM219BQ5XKK7 198 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 LAYNQ6UX15 382 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 NPAS2Q99743 824 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 GATA5Q9BWX5 397 aaPredicted RBP12.67□□□□□ -0.38
CHMP3-201ENST00000263856 DNAJC28Q9NX36 388 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 MTMR10Q9NXD2 777 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHMP3-201ENST00000263856 PIM2Q9P1W9 311 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 SORCS3Q9UPU3 1222 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 LZTS1Q9Y250 596 aa12.67□□□□□ -0.38
CHMP3-201ENST00000263856 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 TMEM233B4DJY2 109 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 HNRNPRO43390 633 aaKnown RBP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 C2P06681 752 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 SRGAP2BP0DMP2 458 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 ARSAP15289 507 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 BAG6P46379 1132 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 KCTD2Q14681 263 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 DPYSL2Q16555 572 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 RARS2Q5T160 578 aaKnown RBP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 LRRC8BQ6P9F7 803 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 PCDH20Q8N6Y1 951 aaKnown RBP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 RNF139Q8WU17 664 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 APBB2Q92870 758 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 NMRAL1Q9HBL8 299 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 CHRAC1Q9NRG0 131 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 RHBDL2Q9NX52 303 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 GTSE1Q9NYZ3 720 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 MORF4L1Q9UBU8 362 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 TLK1Q9UKI8 766 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 VANGL2Q9ULK5 521 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 AP4B1Q9Y6B7 739 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 KPNA7A9QM74 516 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 PRKCGP05129 697 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 MCF2P10911 925 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 SERPINB8P50452 374 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 LBX2Q6XYB7 198 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 BNC2Q6ZN30 1099 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 EGFL6Q8IUX8 553 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 DSELQ8IZU8 1212 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 SLC35F5Q8WV83 523 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 ILKAPQ9H0C8 392 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-201ENST00000263856 ASB7Q9H672 318 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 BFARQ9NZS9 450 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 DNAJB4Q9UDY4 337 aa12.66□□□□□ -0.38
CHMP3-201ENST00000263856 ANK1P16157 1881 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 GAS2O43903 313 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 TRIM13O60858 407 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 ZBTB7AO95365 584 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 NDUFV1P49821 464 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 COG7P83436 770 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 VGLL4Q14135 290 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 USP10Q14694 798 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 R3HDM1Q15032 1099 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 LSM12Q3MHD2 195 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 MAP3K21Q5TCX8 1036 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 URGCPQ8TCY9 931 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 ABTB1Q969K4 478 aaPredicted RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 ZMAT2Q96NC0 199 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 APBA2Q99767 749 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 MED10Q9BTT4 135 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 SNX25Q9H3E2 840 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 ELP3Q9H9T3 547 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 SNX10Q9Y5X0 201 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 ZNF638Q14966 1978 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 PTPRFP10586 1907 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 EEF2KO00418 725 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 XPO1O14980 1071 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 JUNP05412 331 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 SOX11P35716 441 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms