RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HCFC2Q9Y5Z7 792 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 CPQQ9Y646 472 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 NUP205Q92621 2012 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 NYNRINQ9P2P1 1898 aaKnown RBP23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 GOLGA6BA6NDN3 693 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 KCNK1O00180 336 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 GJA1P17302 382 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 CCNCP24863 283 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 ADGRF1Q5T601 910 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 RFWD3Q6PCD5 774 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 ARHGAP36Q6ZRI8 547 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 LRRC49Q8IUZ0 686 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 ATPAF2Q8N5M1 289 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 SHKBP1Q8TBC3 707 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 ZSCAN18Q8TBC5 510 aaPredicted RBP23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 ZIM3Q96PE6 472 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 PHACTR1Q9C0D0 580 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 SEMA4AQ9H3S1 761 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 ZDHHC7Q9NXF8 308 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 DPP7Q9UHL4 492 aa23.47■■□□□ 1.35
SMARCB1-201ENST00000263121 TRAV19A0A0A6YYK7 116 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 AGPSO00116 658 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 MAFKO60675 156 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 MAPKAPK2P49137 400 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 SEMA5AQ13591 1074 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 STXBP5Q5T5C0 1151 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 FAXCQ5TGI0 409 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 Q6ZNB5 142 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 TRMT10CQ7L0Y3 403 aaKnown RBP23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 CIR1Q86X95 450 aaPredicted RBP23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 ARNTL2Q8WYA1 636 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 PRICKLE1Q96MT3 831 aaPredicted RBP23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 RBM15Q96T37 977 aaKnown RBP eCLIP23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 CEP41Q9BYV8 373 aa23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 DNAJC17Q9NVM6 304 aaKnown RBP23.46■■□□□ 1.35
SMARCB1-201ENST00000263121 H0YGN5 161 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 XYLBO75191 536 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 MOSPD3O75425 235 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 CKMP06732 381 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 FDFT1P37268 417 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 PAPOLAP51003 745 aaKnown RBP23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 GAD2Q05329 585 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 RABGAP1LQ5R372 815 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 RBM23Q86U06 439 aaKnown RBP23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 LEMD2Q8NC56 503 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 VAT1Q99536 393 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 DDX50Q9BQ39 737 aaKnown RBP23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 SLC46A2Q9BY10 475 aa23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 CDC42EP4Q9H3Q1 356 aaKnown RBP23.45■■□□□ 1.34
SMARCB1-201ENST00000263121 RHOP08100 348 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 ZBTB17Q13105 803 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 GDPD5Q8WTR4 605 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 EXOC4Q96A65 974 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 TCEAL4Q96EI5 215 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 PRKD2Q9BZL6 878 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 IGSF9Q9P2J2 1179 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 PLAAQ9Y263 795 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 ZFP37Q9Y6Q3 630 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 EPOPA6NHQ4 379 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 GOLGA8MH3BSY2 632 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 TPSB2P20231 275 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 DDX6P26196 483 aaKnown RBP eCLIP23.44■■□□□ 1.349e-7■■■■■ 33.4
SMARCB1-201ENST00000263121 TPSAB1Q15661 275 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 HIF1AQ16665 826 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 DUSP6Q16828 381 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 PARP6Q2NL67 630 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 TEX44Q53QW1 395 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 LRIG3Q6UXM1 1119 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 CFAP52Q8N1V2 620 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 ZNF707Q96C28 371 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 HMCESQ96FZ2 354 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 TLE6Q9H808 572 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 SLC28A3Q9HAS3 691 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 KLHL8Q9P2G9 620 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 TRHDEQ9UKU6 1024 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 NFS1Q9Y697 457 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 SHROOM3Q8TF72 1996 aa23.44■■□□□ 1.34
SMARCB1-201ENST00000263121 NOTCH4Q99466 2003 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 RASA4BC9J798 803 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 RIPK2O43353 540 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 RASA4O43374 803 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 CDH4P55283 916 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 ARL4CP56559 192 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 IFI35P80217 286 aaPredicted RBP23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 CBLBQ13191 982 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 UBAP2Q5T6F2 1119 aaKnown RBP23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 TIGD7Q6NT04 549 aaPredicted RBP23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 ELMSAN1Q6PJG2 1045 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 CENPUQ71F23 418 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 PID1Q7Z2X4 250 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 FAM217AQ8IXS0 508 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 FATE1Q969F0 183 aa23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 HELZP42694 1942 aaKnown RBP23.43■■□□□ 1.34
SMARCB1-201ENST00000263121 ARHGAP42A6NI28 874 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 SOBPA7XYQ1 873 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 E7ESA3 106 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 GFRA2O00451 464 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 MATN3O15232 486 aa23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 EIF3HO15372 352 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMARCB1-201ENST00000263121 PAPLNO95428 1278 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms