RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 NPWQ8N729 165 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 MAPK15Q8TD08 544 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 ZNF483Q8TF39 744 aaPredicted RBP16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 LENG1Q96BZ8 264 aaPredicted RBP16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 DUSP16Q9BY84 665 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 VANGL2Q9ULK5 521 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 PPP1R12AO14974 1030 aaPredicted RBP16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 KLHL2O95198 593 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 LTFP02788 710 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 FYNP06241 537 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 SAT1P21673 171 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 NOS2P35228 1153 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 SCNN1AP37088 669 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 CCR10P46092 362 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 TAF6P49848 677 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 DSG1Q02413 1049 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 CDC16Q13042 620 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 SLC9B1Q4ZJI4 515 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 DEFB107AQ8IZN7 70 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 RBBP8Q99708 897 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 CPNE1Q99829 537 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 ECSITQ9BQ95 431 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 VCXQ9H320 206 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 LRRC4Q9HBW1 653 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 CHRAC1Q9NRG0 131 aa16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 MRPL42Q9Y6G3 142 aaKnown RBP16.74■□□□□ 0.27
TM9SF1-201ENST00000261789 SHROOM3Q8TF72 1996 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 DCLK1O15075 740 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 DARSP14868 501 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 DGKDQ16760 1214 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 LPCAT4Q643R3 524 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 WSCD1Q658N2 575 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 CLEC20AQ6ZU45 233 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 DPP9Q86TI2 863 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 SHCBP1Q8NEM2 672 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 SPDYE1Q8NFV5 336 aaPredicted RBP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 NT5C3BQ969T7 300 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 KCNK16Q96T55 309 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 MED10Q9BTT4 135 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 GDAP2Q9NXN4 497 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 RCOR3Q9P2K3 495 aaPredicted RBP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 SORCS3Q9UPU3 1222 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 A0A096LPK6 155 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 GOLGA8QA0A0J9YX86 632 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 ZCWPW2A0A1B0GU75 182 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 RBM47A0AV96 593 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 GOLGA8OA6NCC3 632 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 YJEFN3A6XGL0 299 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 GOLGA8NF8WBI6 632 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 DAB1O75553 588 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 CYP2C9P11712 490 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 NPR3P17342 541 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 MX2P20592 715 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 GRK2P25098 689 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 TKTL1P51854 596 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 CUL3Q13618 768 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 CCNIQ14094 377 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 PAFAH1B3Q15102 231 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 SIX6OS1Q8N1H7 587 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 WNT8BQ93098 351 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 S100A14Q9HCY8 104 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 DNAJC28Q9NX36 388 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 IGSF9Q9P2J2 1179 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 CDH22Q9UJ99 828 aa16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 G3BP2Q9UN86 482 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 TIMM13Q9Y5L4 95 aaPredicted RBP16.73■□□□□ 0.27
TM9SF1-201ENST00000261789 G3V2L1 256 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 BUD23O43709 281 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 CD4P01730 458 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 SMIM10L2AP0DMW4 78 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 SMIM10L2BP0DMW5 78 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ITGAXP20702 1163 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 CD68P34810 354 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 HARS2P49590 506 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ZBTB17Q13105 803 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ITGA7Q13683 1181 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 SPANXN3Q5MJ09 141 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 GRTP1Q5TC63 336 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 GPRIN1Q7Z2K8 1008 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 PSTKQ8IV42 348 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 TNIP3Q96KP6 325 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 TSC22D3Q99576 134 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 FERMT1Q9BQL6 677 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 SIKE1Q9BRV8 207 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 NAT9Q9BTE0 207 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 EBF3Q9H4W6 596 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 TMEM30AQ9NV96 361 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ADAMTS6Q9UKP5 1117 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ASB3Q9Y575 518 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 TRIP12Q14669 1992 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 HSPA4LO95757 839 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 ATP5BP06576 529 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 CHRNGP07510 517 aa16.72■□□□□ 0.27
TM9SF1-201ENST00000261789 PTPN1P18031 435 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms