RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 MMS22LQ6ZRQ5 1243 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 SND1Q7KZF4 910 aaKnown RBP eCLIP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 ERICH1Q86X53 443 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 DHX40Q8IX18 779 aaKnown RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 APCDD1Q8J025 514 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 OR2I1PQ8NGU4 316 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 C1orf216Q8TAB5 229 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 ENOX1Q8TC92 643 aaKnown RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 GANCQ8TET4 914 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 C18orf8Q96DM3 657 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 PGAP3Q96FM1 320 aaPredicted RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 RPRD1AQ96P16 312 aaPredicted RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 GBP4Q96PP9 640 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 NAA15Q9BXJ9 866 aaKnown RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 STK33Q9BYT3 514 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 C6orf106Q9H6K1 298 aaPredicted RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 PLCB1Q9NQ66 1216 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 SAMSN1Q9NSI8 373 aaKnown RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 LMBRD1Q9NUN5 540 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 FBXL12Q9NXK8 326 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 FZD4Q9ULV1 537 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 TPX2Q9ULW0 747 aaKnown RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 WASF3Q9UPY6 502 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 DAAM1Q9Y4D1 1078 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 FASNP49327 2511 aaKnown RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 ZFYVE26Q68DK2 2539 aa9.54□□□□□ -0.88
LIN7A-201ENST00000261203 ANKRD11Q6UB99 2663 aaPredicted RBP9.54□□□□□ -0.88
LIN7A-201ENST00000261203 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 LRRC72A6NJI9 287 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 TTC34A8MYJ7 566 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 F8VZ95 297 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 GOLGA6L22H0YM25 854 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 PAGE1O75459 146 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 CLDN11O75508 207 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 FSBPO95073 299 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 TRIM16O95361 564 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 ADH1BP00325 375 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 F9P00740 461 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 PROS1P07225 676 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 PDGFRAP16234 1089 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 CD27P26842 260 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 CTSOP43234 321 aaPredicted RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 GRIA4P48058 902 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 CXCR3P49682 368 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 SIM1P81133 766 aaPredicted RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 ZNF177Q13360 481 aaPredicted RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 ELAVL3Q14576 367 aaKnown RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 ZNF423Q2M1K9 1284 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 SLC25A52Q3SY17 297 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 C5orf22Q49AR2 442 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 FAM102AQ5T9C2 384 aaPredicted RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 CXorf57Q6NSI4 855 aaKnown RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 RBM43Q6ZSC3 357 aaKnown RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 CIR1Q86X95 450 aaPredicted RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 ZNF677Q86XU0 584 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 NAXDQ8IW45 347 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 NT5C3BQ969T7 300 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 BIRC7Q96CA5 298 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 RPL10LQ96L21 214 aaKnown RBP9.53□□□□□ -0.88
LIN7A-201ENST00000261203 NPY6RQ99463 290 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 OMDQ99983 421 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 MTG2Q9H4K7 406 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 WDCPQ9H6R7 721 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 GAREM1Q9H706 876 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 ADAMTS1Q9UHI8 967 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 SLCO3A1Q9UIG8 710 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 SLC25A13Q9UJS0 675 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 VANGL2Q9ULK5 521 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 PCDHB9Q9Y5E1 797 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 PCDHGB2Q9Y5G2 931 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 HS3ST4Q9Y661 456 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 WDFY3Q8IZQ1 3526 aa9.53□□□□□ -0.88
LIN7A-201ENST00000261203 SPAARA0A1B0GVQ0 90 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 A0A1B0GVT2 93 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 A0A1W2PP55 124 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 MID1O15344 667 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 SH3BP5O60239 455 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 RNASEH2AO75792 299 aaKnown RBP9.52□□□□□ -0.89
LIN7A-201ENST00000261203 GOT1P17174 413 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 C5AR1P21730 350 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 MZF1P28698 734 aaPredicted RBP9.52□□□□□ -0.89
LIN7A-201ENST00000261203 SLC8A1P32418 973 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 PSMD8P48556 350 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 CSNK1EP49674 416 aaKnown RBP9.52□□□□□ -0.89
LIN7A-201ENST00000261203 SULT1E1P49888 294 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 CDH4P55283 916 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 RNASE9P60153 205 aaKnown RBP9.52□□□□□ -0.89
LIN7A-201ENST00000261203 CENPCQ03188 943 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 COL9A2Q14055 689 aaPredicted RBP9.52□□□□□ -0.89
LIN7A-201ENST00000261203 KRT31Q15323 416 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 TRIP6Q15654 476 aaKnown RBP9.52□□□□□ -0.89
LIN7A-201ENST00000261203 HLA-BQ31612 363 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 FKBP15Q5T1M5 1219 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 CDKAL1Q5VV42 579 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 KIAA0895LQ68EN5 471 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 ARCQ7LC44 396 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 XYLT1Q86Y38 959 aa9.52□□□□□ -0.89
LIN7A-201ENST00000261203 MMAAQ8IVH4 418 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms