RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LCHNA4D1U4 455 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 WASH4PA8MWX3 477 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 POC1B-GALNT4F8VUJ3 575 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 CBLBQ13191 982 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 EFTUD2Q15029 972 aaKnown RBP eCLIP22.9■■□□□ 1.26
SIX3-201ENST00000260653 TEX44Q53QW1 395 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 AFMIDQ63HM1 303 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 NUGGCQ68CJ6 796 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 TADA2BQ86TJ2 420 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 FBF1Q8TES7 1133 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 MYEOVQ96EZ4 313 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 STMN4Q9H169 189 aaPredicted RBP22.9■■□□□ 1.26
SIX3-201ENST00000260653 NOL6Q9H6R4 1146 aaKnown RBP22.9■■□□□ 1.26
SIX3-201ENST00000260653 EIF2B3Q9NR50 452 aaKnown RBP22.9■■□□□ 1.26
SIX3-201ENST00000260653 ANAPC1Q9H1A4 1944 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 MAFKO60675 156 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 CSPG5O95196 566 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 JCHAINP01591 159 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 KPNA1P52294 538 aaPredicted RBP22.9■■□□□ 1.26
SIX3-201ENST00000260653 DNAJB7Q7Z6W7 309 aaPredicted RBP22.9■■□□□ 1.26
SIX3-201ENST00000260653 CHSY1Q86X52 802 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 CIR1Q86X95 450 aaPredicted RBP22.9■■□□□ 1.26
SIX3-201ENST00000260653 USP33Q8TEY7 942 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 TSGA13Q96PP4 275 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 RXFP1Q9HBX9 757 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 XAB2Q9HCS7 855 aaKnown RBP22.9■■□□□ 1.26
SIX3-201ENST00000260653 PPARGC1AQ9UBK2 798 aaKnown RBP22.9■■□□□ 1.26
SIX3-201ENST00000260653 RSPH14Q9UHP6 348 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 LGALS13Q9UHV8 139 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 RHOQP17081 205 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 CDK16Q00536 496 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 GUCY1A3Q02108 690 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 PSRC1Q6PGN9 363 aaPredicted RBP22.89■■□□□ 1.26
SIX3-201ENST00000260653 HERC6Q8IVU3 1022 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 MPP5Q8N3R9 675 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 ARFGAP2Q8N6H7 521 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 MRRFQ96E11 262 aaKnown RBP22.89■■□□□ 1.26
SIX3-201ENST00000260653 CFAP36Q96G28 342 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 ZNF419Q96HQ0 510 aaPredicted RBP22.89■■□□□ 1.26
SIX3-201ENST00000260653 RPRD1AQ96P16 312 aaPredicted RBP22.89■■□□□ 1.26
SIX3-201ENST00000260653 GBA3Q9H227 469 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 PIH1D1Q9NWS0 290 aaKnown RBP22.89■■□□□ 1.26
SIX3-201ENST00000260653 CHD7Q9P2D1 2997 aa22.89■■□□□ 1.26
SIX3-201ENST00000260653 C2orf78A6NCI8 922 aa22.89■■□□□ 1.25
SIX3-201ENST00000260653 CCNCP24863 283 aa22.89■■□□□ 1.25
SIX3-201ENST00000260653 ZNF33AQ06730 810 aa22.89■■□□□ 1.25
SIX3-201ENST00000260653 TEKT5Q96M29 485 aa22.89■■□□□ 1.25
SIX3-201ENST00000260653 VAT1Q99536 393 aa22.89■■□□□ 1.25
SIX3-201ENST00000260653 TMEM248Q9NWD8 314 aa22.89■■□□□ 1.25
SIX3-201ENST00000260653 TRHDEQ9UKU6 1024 aa22.89■■□□□ 1.25
SIX3-201ENST00000260653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 TGM5O43548 720 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 SHOX2O60902 331 aaPredicted RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 NFKB1P19838 968 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 PAPOLAP51003 745 aaKnown RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 EPHB3P54753 998 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 OLIG2Q13516 323 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 SPARCL1Q14515 664 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 KLHDC10Q6PID8 442 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 EXOC3L1Q86VI1 746 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 GPR65Q8IYL9 337 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 PSMG2Q969U7 264 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 SIGLEC10Q96LC7 697 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 XPO6Q96QU8 1125 aaKnown RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 TRIM56Q9BRZ2 755 aaKnown RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 RNF38Q9H0F5 515 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 ACSS3Q9H6R3 686 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 ZC3H7BQ9UGR2 993 aaKnown RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 CCNB1P14635 433 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 TSHRP16473 764 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 ATP2A2P16615 1042 aaKnown RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 SARNPP82979 210 aaKnown RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 TMED2Q15363 201 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 TMC7Q7Z402 723 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 TMEM150AQ86TG1 271 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 UMODL1-AS1Q8N2C9 162 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 CNTD1Q8N815 330 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 ARHGEF2Q92974 986 aaKnown RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 RAD9AQ99638 391 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 PLAC1Q9HBJ0 212 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 ZNF334Q9HCZ1 680 aaPredicted RBP22.88■■□□□ 1.25
SIX3-201ENST00000260653 SLC4A7Q9Y6M7 1214 aa22.88■■□□□ 1.25
SIX3-201ENST00000260653 TCRBV9S1A1TA0A576 114 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 GNGT1P63211 74 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 CREMQ03060 361 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 STK39Q9UEW8 545 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 MAD1L1Q9Y6D9 718 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 ARHGAP42A6NI28 874 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 TLL1O43897 1013 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 CPP00450 1065 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 OAS1P00973 400 aaKnown RBP22.87■■□□□ 1.25
SIX3-201ENST00000260653 TACR2P21452 398 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.87■■□□□ 1.25
SIX3-201ENST00000260653 LRRC39Q96DD0 335 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 ALG13Q9NP73 1137 aaKnown RBP22.87■■□□□ 1.25
SIX3-201ENST00000260653 GKN1Q9NS71 199 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 ZNF212Q9UDV6 495 aa22.87■■□□□ 1.25
SIX3-201ENST00000260653 DRGXA6NNA5 263 aa22.86■■□□□ 1.25
SIX3-201ENST00000260653 CXCL14O95715 111 aa22.86■■□□□ 1.25
SIX3-201ENST00000260653 FAM133BQ5BKY9 247 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms