RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 OR12D3Q9UGF7 316 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 CACNA1IQ9P0X4 2223 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 MUC6Q6W4X9 2439 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 E9PAM4 449 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 K7ESF4 209 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 SRGAP2O75044 1071 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 NDUFA10O95299 355 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 HNRNPLP14866 589 aaKnown RBP eCLIP17.26■□□□□ 0.35
SDCBP-201ENST00000260130 IRAK1P51617 712 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 ZNF252P-AS1Q0IIN9 211 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 LMAN2Q12907 356 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 EOGTQ5NDL2 527 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 BEND6Q5SZJ8 279 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-201ENST00000260130 CHST9Q7L1S5 443 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 ADIPOR2Q86V24 386 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 IGLV3-10A0A075B6K4 115 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 SGK1O00141 431 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 CLDN11O75508 207 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 RNF8O76064 485 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 H2AFZP0C0S5 128 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 TDGF1P13385 188 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 NTSR1P30989 418 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 AIF1P55008 147 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 CDH4P55283 916 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 SCAPQ12770 1279 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 E2F5Q15329 346 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 SDE2Q6IQ49 451 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 H2AFVQ71UI9 128 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 CHPFQ8IZ52 775 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 CTNNBL1Q8WYA6 563 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-201ENST00000260130 ACOX2Q99424 681 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 NUP85Q9BW27 656 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 PACSIN1Q9BY11 444 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 FAM126AQ9BYI3 521 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-201ENST00000260130 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-201ENST00000260130 NPC1O15118 1278 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 ADAM23O75077 832 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 CNTN5O94779 1100 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 HOXA6P31267 233 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 NRG1Q02297 640 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-201ENST00000260130 ZNF177Q13360 481 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-201ENST00000260130 CRY1Q16526 586 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 MBLAC2Q68D91 279 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 CAMKK1Q8N5S9 505 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 ARFGAP1Q8N6T3 406 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 ATOH1Q92858 354 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-201ENST00000260130 MAGEB5Q9BZ81 275 aa17.25■□□□□ 0.35
SDCBP-201ENST00000260130 THAP10Q9P2Z0 257 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-201ENST00000260130 POLR2EP19388 210 aaKnown RBP17.24■□□□□ 0.35
SDCBP-201ENST00000260130 HOXC13P31276 330 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 NRLP54845 237 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 OXCT1P55809 520 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 ACAP1Q15027 740 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 ALFQ53S48 1182 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 ARTNQ5T4W7 220 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 SORCS1Q8WY21 1168 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 NELL1Q92832 810 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 NCAPGQ9BPX3 1015 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 PSD3Q9NYI0 1048 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 MPP6Q9NZW5 540 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 PPARGC1AQ9UBK2 798 aaKnown RBP17.24■□□□□ 0.35
SDCBP-201ENST00000260130 INTS6Q9UL03 887 aaKnown RBP17.24■□□□□ 0.35
SDCBP-201ENST00000260130 FZD10Q9ULW2 581 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 ATG2BQ96BY7 2078 aa17.24■□□□□ 0.35
SDCBP-201ENST00000260130 ATP5BP06576 529 aaKnown RBP17.23■□□□□ 0.35
SDCBP-201ENST00000260130 TMEM253P0C7T8 217 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 WASP42768 502 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 SLC12A1Q13621 1099 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 PIGHQ14442 188 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-201ENST00000260130 FUT11Q495W5 492 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 EFHC2Q5JST6 749 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 CXorf57Q6NSI4 855 aaKnown RBP17.23■□□□□ 0.35
SDCBP-201ENST00000260130 TMEM92Q6UXU6 159 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 TTC17Q96AE7 1141 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 ZYG11BQ9C0D3 744 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 CACNA2D2Q9NY47 1150 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 CTTNBP2NLQ9P2B4 639 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 IP6K2Q9UHH9 426 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 ANAPC7Q9UJX3 599 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 PLA2G4CQ9UP65 541 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 TBC1D30Q9Y2I9 924 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 FAM72CH0Y354 149 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 MOCS3O95396 460 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 DGKEP52429 567 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 KRT83P78385 493 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 PITRM1Q5JRX3 1037 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 FAM72AQ5TYM5 149 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 MANEALQ5VSG8 457 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 FAM72DQ6L9T8 149 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 FAM72BQ86X60 149 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 CCDC170Q8IYT3 715 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 HHIPQ96QV1 700 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 ZSCAN32Q9NX65 697 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 UVRAGQ9P2Y5 699 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 STON1Q9Y6Q2 735 aa17.23■□□□□ 0.35
SDCBP-201ENST00000260130 WASH3PC4AMC7 463 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 MYO1FO00160 1098 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 LRCH4O75427 683 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 DLDP09622 509 aaKnown RBP17.22■□□□□ 0.35
SDCBP-201ENST00000260130 HOXB2P14652 356 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms