RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PPP1R36Q96LQ0 422 aa14.99□□□□□ -0.01
TRAFD1-201ENST00000257604 NMUR1Q9HB89 426 aa14.99□□□□□ -0.01
TRAFD1-201ENST00000257604 CNGB3Q9NQW8 809 aa14.99□□□□□ -0.01
TRAFD1-201ENST00000257604 CHST12Q9NRB3 414 aa14.99□□□□□ -0.01
TRAFD1-201ENST00000257604 ZNF358Q9NW07 568 aa14.99□□□□□ -0.01
TRAFD1-201ENST00000257604 ZFP69BQ9UJL9 534 aa14.99□□□□□ -0.01
TRAFD1-201ENST00000257604 LRFN2Q9ULH4 789 aa14.99□□□□□ -0.01
TRAFD1-201ENST00000257604 ARHGAP42A6NI28 874 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 ZBTB17Q13105 803 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 POU6F1Q14863 301 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 CTXN3Q4LDR2 81 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 HSP90AA5PQ58FG0 334 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 SPOUT1Q5T280 376 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 EBNA1BP2Q99848 306 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 C11orf84Q9BUA3 381 aaPredicted RBP14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 CAB39LQ9H9S4 337 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 TRDMT1O14717 391 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 UBTFL6P0CB48 400 aaPredicted RBP14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 WASHC5Q12768 1159 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 LRRC36Q1X8D7 754 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 CLLU1OSQ5K130 101 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 OTOAQ7RTW8 1153 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 TTC7BQ86TV6 843 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 RASSF3Q86WH2 238 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 RIBC1Q8N443 379 aaPredicted RBP14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 SIGLEC10Q96LC7 697 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 AGAP2Q99490 1192 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 NACA2Q9H009 215 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 MANSC1Q9H8J5 431 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 IRAK4Q9NWZ3 460 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 EURLQ9NYK6 297 aa14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 SMG5Q9UPR3 1016 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-201ENST00000257604 A0A1B0GVG6 124 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 PAGE1O75459 146 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 TCEA3O75764 348 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 ZCCHC18P0CG32 403 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 KCNA4P22459 653 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 ALDH3A1P30838 453 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 TM4SF4P48230 202 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 NR2C2P49116 596 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 NOMO2Q5JPE7 1267 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 IL31Q6EBC2 164 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 ZNF534Q76KX8 674 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 NLRP9Q7RTR0 991 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 SLC44A1Q8WWI5 657 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 FCRL2Q96LA5 508 aaPredicted RBP14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 ZNF778Q96MU6 729 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 CHRAC1Q9NRG0 131 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 TBC1D13Q9NVG8 400 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 FBXW11Q9UKB1 542 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 SHROOM3Q8TF72 1996 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 A6NHS1 94 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 LUC7L3O95232 432 aaKnown RBP14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 SNRPAP09012 282 aaKnown RBP14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 AVPR1AP37288 418 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 USP46P62068 366 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 MGAT3Q09327 533 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 NR1H3Q13133 447 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 RELL1Q8IUW5 271 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 KLHL5Q96PQ7 755 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 SRRDQ9UH36 339 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 TET1Q8NFU7 2136 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 SDR42E2A6NKP2 422 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 E7ESA3 106 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 PTPN3P26045 913 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 NOGQ13253 232 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 RCN2Q14257 317 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 RCN1Q15293 331 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 SPATA6LQ8N4H0 392 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 PHC3Q8NDX5 983 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 DNAJC9Q8WXX5 260 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 GRAMD1AQ96CP6 724 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 MIPEPQ99797 713 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 CREBZFQ9NS37 354 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 STARD13Q9Y3M8 1113 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 TRIM17Q9Y577 477 aa14.97□□□□□ -0.01
TRAFD1-201ENST00000257604 ZNF638Q14966 1978 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 TYROBPO43914 113 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 EDF1O60869 148 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 DNAJC6O75061 913 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 GCATO75600 419 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 RPL9P32969 192 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 DLG2Q15700 870 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 TTC39BQ5VTQ0 682 aaPredicted RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 PRSS55Q6UWB4 352 aaPredicted RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 LMNTD2Q8IXW0 634 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 GSDMBQ8TAX9 411 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 C10orf82Q8WW14 230 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 FAM136AQ96C01 138 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 ACBD6Q9BR61 282 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 SHCBP1LQ9BZQ2 653 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 CPSF2Q9P2I0 782 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 MYO9BQ13459 2157 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 CCL22O00626 93 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 BUD23O43709 281 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 FBXO21O94952 628 aa14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 SKIV2L2P42285 1042 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 RPL10AP62906 217 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 KPNB1Q14974 876 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-201ENST00000257604 CHI3L2Q15782 390 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms