RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 CALRP27797 417 aaKnown RBP13.81□□□□□ -0.2
VHL-201ENST00000256474 ITKQ08881 620 aa13.81□□□□□ -0.2
VHL-201ENST00000256474 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.81□□□□□ -0.2
VHL-201ENST00000256474 ZNF484Q5JVG2 852 aa13.81□□□□□ -0.2
VHL-201ENST00000256474 KYAT3Q6YP21 454 aaKnown RBP13.81□□□□□ -0.2
VHL-201ENST00000256474 SREK1Q8WXA9 508 aaKnown RBP13.81□□□□□ -0.2
VHL-201ENST00000256474 FRMD8Q9BZ67 464 aaPredicted RBP13.81□□□□□ -0.2
VHL-201ENST00000256474 GCOM2Q9BZD3 368 aaPredicted RBP13.81□□□□□ -0.2
VHL-201ENST00000256474 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
VHL-201ENST00000256474 S100A14Q9HCY8 104 aa13.81□□□□□ -0.2
VHL-201ENST00000256474 PIGVQ9NUD9 493 aa13.81□□□□□ -0.2
VHL-201ENST00000256474 RUVBL2Q9Y230 463 aaKnown RBP13.81□□□□□ -0.2
VHL-201ENST00000256474 MCM3APO60318 1980 aa13.81□□□□□ -0.2
VHL-201ENST00000256474 MAGEC1O60732 1142 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 PIGNO95427 931 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 TSHRP16473 764 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 FGFR3P22607 806 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 ART3Q13508 389 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 RBBP5Q15291 538 aaKnown RBP13.8□□□□□ -0.2
VHL-201ENST00000256474 DPYSL2Q16555 572 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 GEN1Q17RS7 908 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 C9orf57Q5W0N0 161 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 DHDDSQ86SQ9 333 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.8□□□□□ -0.2
VHL-201ENST00000256474 KCTD4Q8WVF5 259 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 LRRC39Q96DD0 335 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 CMTM5Q96DZ9 223 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 GJD2Q9UKL4 321 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 POMPQ9Y244 141 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 XIRP2A4UGR9 3374 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 FZD9O00144 591 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
VHL-201ENST00000256474 INCA1Q0VD86 236 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 MPP3Q13368 585 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 PDK1Q15118 436 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 FOXB2Q5VYV0 432 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 ANKRD52Q8NB46 1076 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 PNPLA8Q9NP80 782 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 TCF7L2Q9NQB0 619 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 CHST12Q9NRB3 414 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 KIAA1257Q9ULG3 409 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 FNDC3AQ9Y2H6 1198 aaKnown RBP13.8□□□□□ -0.2
VHL-201ENST00000256474 CNMDO75829 334 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 OR6B1O95007 311 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 SLC25A27O95847 323 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 MT-CYBP00156 380 aaPredicted RBP13.8□□□□□ -0.2
VHL-201ENST00000256474 COX4I1P13073 169 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 CYTH1Q15438 398 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 PCDH20Q8N6Y1 951 aaKnown RBP13.8□□□□□ -0.2
VHL-201ENST00000256474 ICA1LQ8NDH6 482 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 SEMA6AQ9H2E6 1030 aa13.8□□□□□ -0.2
VHL-201ENST00000256474 NEMP2A6NFY4 417 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 NRP1O14786 923 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 KLF11O14901 512 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 HNRNPLP14866 589 aaKnown RBP eCLIP13.79□□□□□ -0.2
VHL-201ENST00000256474 FDFT1P37268 417 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 SEMA5AQ13591 1074 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 KCNMB4Q86W47 210 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 ST13P4Q8IZP2 240 aaPredicted RBP13.79□□□□□ -0.2
VHL-201ENST00000256474 ARNTL2Q8WYA1 636 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 MMADHCQ9H3L0 296 aaPredicted RBP13.79□□□□□ -0.2
VHL-201ENST00000256474 NMRAL1Q9HBL8 299 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 MOCS1Q9NZB8 636 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 MEIS3P2A8K0S8 358 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 CCL22O00626 93 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 SNNO75324 88 aaPredicted RBP13.79□□□□□ -0.2
VHL-201ENST00000256474 VAPBO95292 243 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 SLC4A1P02730 911 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 NMBRP28336 390 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 GSTT1P30711 240 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 MATKP42679 507 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 SOX4Q06945 474 aaPredicted RBP13.79□□□□□ -0.2
VHL-201ENST00000256474 OR52E8Q6IFG1 317 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 URGCPQ8TCY9 931 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 RCN3Q96D15 328 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 LRGUKQ96M69 825 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 GATA5Q9BWX5 397 aaPredicted RBP13.79□□□□□ -0.2
VHL-201ENST00000256474 VPS33BQ9H267 617 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 IL1RL2Q9HB29 575 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
VHL-201ENST00000256474 STAP1Q9ULZ2 295 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 SMIM28A0A1B0GU29 152 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.79□□□□□ -0.2
VHL-201ENST00000256474 CSPG5O95196 566 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 TPSB2P20231 275 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 ITGAXP20702 1163 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 CXCR3P49682 368 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 FLOT2Q14254 428 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 TPSAB1Q15661 275 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 ERO1BQ86YB8 467 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 DENND6AQ8IWF6 608 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 SORT1Q99523 831 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 NPAS2Q99743 824 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 SH3GL3Q99963 347 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 PLEKHA5Q9HAU0 1116 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms