RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ANKRD20A1Q5TYW2 823 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 ANKRD20A3Q5VUR7 823 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 ELMSAN1Q6PJG2 1045 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 ADGRD2Q7Z7M1 963 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 RBM23Q86U06 439 aaKnown RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 ZCCHC9Q8N567 271 aaKnown RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 NAT8LQ8N9F0 302 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 ADAMTS19Q8TE59 1207 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 PRCCQ92733 491 aaPredicted RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 CELF6Q96J87 481 aaKnown RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 SPATA13Q96N96 652 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 SLC39A8Q9C0K1 460 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 NOL6Q9H6R4 1146 aaKnown RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 RAB6BQ9NRW1 208 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 SMPD4Q9NXE4 827 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 DNMT3BQ9UBC3 853 aaKnown RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 AGO1Q9UL18 857 aaKnown RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 TRAV19A0A0A6YYK7 116 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 SOBPA7XYQ1 873 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 KCNK1O00180 336 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 RNF103O00237 685 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 CHADO15335 359 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 GREM1O60565 184 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 PAPLNO95428 1278 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 CKMP06732 381 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 RHOP08100 348 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 IRF1P10914 325 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 CCNCP24863 283 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.86
NIP7-202ENST00000254941 HSD17B3P37058 310 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 MAGEA6P43360 314 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 BASP1P80723 227 aaKnown RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 KCNJ11Q14654 390 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 DUSP6Q16828 381 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 RFWD3Q6PCD5 774 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 TFAP2DQ7Z6R9 452 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 RELL1Q8IUW5 271 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 TNS4Q8IZW8 715 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 LGI2Q8N0V4 545 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 IQCKQ8N0W5 287 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 SHKBP1Q8TBC3 707 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 ZSCAN18Q8TBC5 510 aaPredicted RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 WBP2Q969T9 261 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 MYEOVQ96EZ4 313 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 VAT1Q99536 393 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 DDX50Q9BQ39 737 aaKnown RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 SLC46A2Q9BY10 475 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 PRKD2Q9BZL6 878 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 TLE6Q9H808 572 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 ATP8A1Q9Y2Q0 1164 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 CPQQ9Y646 472 aa9.7□□□□□ -0.86
NIP7-202ENST00000254941 NUP210Q8TEM1 1887 aaPredicted RBP9.7□□□□□ -0.86
NIP7-202ENST00000254941 XIRP2A4UGR9 3374 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 MIA3Q5JRA6 1907 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 CCDC195A0A1B0GUA6 201 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 EPOPA6NHQ4 379 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 DFFAO00273 331 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 MAFKO60675 156 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 MOSPD3O75425 235 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 METTL18O95568 372 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 GJA1P17302 382 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 PTPN3P26045 913 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 CHKAP35790 457 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 MAPKAPK2P49137 400 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 PMS2P54278 862 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 KCNC3Q14003 757 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 UAP1Q16222 522 aaPredicted RBP9.69□□□□□ -0.86
NIP7-202ENST00000254941 RABGAP1LQ5R372 815 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 FAM182AQ5T1J6 154 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 STXBP5Q5T5C0 1151 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 ANKRD22Q5VYY1 191 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 ALS2CLQ60I27 953 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 Q6ZNB5 142 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 ARHGEF18Q6ZSZ5 1173 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 CEP128Q6ZU80 1094 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 CCDC25Q86WR0 208 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 TDHQ8IZJ6 230 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 ZNF567Q8N184 647 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 CFAP52Q8N1V2 620 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 ATPAF2Q8N5M1 289 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 GDPD5Q8WTR4 605 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 DEPDC1BQ8WUY9 529 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 ZNF707Q96C28 371 aaPredicted RBP9.69□□□□□ -0.86
NIP7-202ENST00000254941 PHACTR1Q9C0D0 580 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 PABPC3Q9H361 631 aaKnown RBP9.69□□□□□ -0.86
NIP7-202ENST00000254941 ETNK1Q9HBU6 452 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 TRHDEQ9UKU6 1024 aa9.69□□□□□ -0.86
NIP7-202ENST00000254941 TCRBV7S3A2A0A539 114 aa9.68□□□□□ -0.86
NIP7-202ENST00000254941 TMEM63AO94886 807 aa9.68□□□□□ -0.86
NIP7-202ENST00000254941 APRTP07741 180 aa9.68□□□□□ -0.86
NIP7-202ENST00000254941 OR1E1P30953 314 aa9.68□□□□□ -0.86
NIP7-202ENST00000254941 FDFT1P37268 417 aa9.68□□□□□ -0.86
NIP7-202ENST00000254941 NRIP1P48552 1158 aa9.68□□□□□ -0.86
NIP7-202ENST00000254941 PAPOLAP51003 745 aaKnown RBP9.68□□□□□ -0.86
NIP7-202ENST00000254941 CDH4P55283 916 aa9.68□□□□□ -0.86
NIP7-202ENST00000254941 YBEYP58557 167 aaPredicted RBP9.68□□□□□ -0.86
NIP7-202ENST00000254941 RPS24P62847 133 aaKnown RBP9.68□□□□□ -0.86
NIP7-202ENST00000254941 CBLBQ13191 982 aa9.68□□□□□ -0.86
NIP7-202ENST00000254941 SEMA5AQ13591 1074 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms