RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ZNF177Q13360 481 aaPredicted RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 SLC12A1Q13621 1099 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 PRKD1Q15139 912 aaPredicted RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 TEX35Q5T0J7 233 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 TMCO4Q5TGY1 634 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 TTC27Q6P3X3 843 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 C1orf228Q6PIY5 440 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 CCDC117Q8IWD4 279 aaPredicted RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 ARHGAP12Q8IWW6 846 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 RSAD2Q8WXG1 361 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 ATG4AQ8WYN0 398 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 ZSWIM3Q96MP5 696 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 PRICKLE1Q96MT3 831 aaPredicted RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 ERP44Q9BS26 406 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 LRRC1Q9BTT6 524 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 PCDH9Q9HC56 1237 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 THG1LQ9NWX6 298 aaKnown RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 MARK1Q9P0L2 795 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 CD207Q9UJ71 328 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 NEU2Q9Y3R4 380 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 ATG2AQ2TAZ0 1938 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 GOLGA6L7A0A1B0GV03 622 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 C5orf60A6NFR6 353 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 BHMG1C9JSJ3 638 aaPredicted RBP13.27□□□□□ -0.29
LSM8-201ENST00000249299 H7C0C1 242 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 SMAPO00193 183 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 RAD51CO43502 376 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 RAMP2O60895 175 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 STK10O94804 968 aaKnown RBP13.27□□□□□ -0.29
LSM8-201ENST00000249299 PRAMEF12O95522 483 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 ACTN2P35609 894 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 ATP5OP48047 213 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 PTK6Q13882 451 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 CBX2Q14781 532 aaPredicted RBP13.27□□□□□ -0.29
LSM8-201ENST00000249299 PDGFRLQ15198 375 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 P3H1Q32P28 736 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 FAM78AQ5JUQ0 283 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 HEATR6Q6AI08 1181 aaKnown RBP13.27□□□□□ -0.29
LSM8-201ENST00000249299 WDR93Q6P2C0 686 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 DARS2Q6PI48 645 aaKnown RBP13.27□□□□□ -0.29
LSM8-201ENST00000249299 MTSS1LQ765P7 747 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 OTOP3Q7RTS5 596 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 JAMLQ86YT9 394 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 NPWQ8N729 165 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 BBOF1Q8ND07 529 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 BPIFB1Q8TDL5 484 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 DEPDC1BQ8WUY9 529 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 ING5Q8WYH8 240 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 WBP2Q969T9 261 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 ELSPBP1Q96BH3 223 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 LRCH3Q96II8 777 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 SLC2A11Q9BYW1 496 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 USP29Q9HBJ7 922 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 ZFP14Q9HCL3 533 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 HAUS2Q9NVX0 235 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 MPP6Q9NZW5 540 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 EPS15L1Q9UBC2 864 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 SAE1Q9UBE0 346 aaPredicted RBP13.27□□□□□ -0.29
LSM8-201ENST00000249299 CCL26Q9Y258 94 aa13.27□□□□□ -0.29
LSM8-201ENST00000249299 DENND4CQ5VZ89 1909 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 NOTCH4Q99466 2003 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 PRRC2BQ5JSZ5 2229 aaKnown RBP13.26□□□□□ -0.29
LSM8-201ENST00000249299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.26□□□□□ -0.29
LSM8-201ENST00000249299 OPHN1O60890 802 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 GCATO75600 419 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 CNTN5O94779 1100 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 PENKP01210 267 aaPredicted RBP13.26□□□□□ -0.29
LSM8-201ENST00000249299 LAMP2P13473 410 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 TNFRSF8P28908 595 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 GGCXP38435 758 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 DLX2Q07687 328 aaPredicted RBP13.26□□□□□ -0.29
LSM8-201ENST00000249299 FCHO2Q0JRZ9 810 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 SMAD4Q13485 552 aaKnown RBP13.26□□□□□ -0.29
LSM8-201ENST00000249299 SNX1Q13596 522 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 CUL1Q13616 776 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 POLD3Q15054 466 aaPredicted RBP13.26□□□□□ -0.29
LSM8-201ENST00000249299 PPP1R7Q15435 360 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 ANO4Q32M45 955 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 ALFQ53S48 1182 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 DUPD1Q68J44 220 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 RFWD3Q6PCD5 774 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 NPNTQ6UXI9 565 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 GET4Q7L5D6 327 aaPredicted RBP13.26□□□□□ -0.29
LSM8-201ENST00000249299 GSTA5Q7RTV2 222 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
LSM8-201ENST00000249299 IFT20Q8IY31 132 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 ADGRG2Q8IZP9 1017 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 LRRN4CLQ8ND94 238 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 FIBINQ8TAL6 211 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 HTR3CQ8WXA8 447 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 IRF7Q92985 503 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 NXPE3Q969Y0 559 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 CCDC114Q96M63 670 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 ZNF599Q96NL3 588 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 PPP1R2P1Q96PQ5 205 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 FAM114A2Q9NRY5 505 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 TRHDEQ9UKU6 1024 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms