RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 RETREG1Q9H6L5 497 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 SMPD4Q9NXE4 827 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 TCRBV7S3A2A0A539 114 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 ARHGAP42A6NI28 874 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 H3BNC9 293 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 METTL18O95568 372 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 ACSL3O95573 720 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 NUDT17P0C025 328 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 PTPN3P26045 913 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 OAS2P29728 719 aaKnown RBP19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 SMAD3P84022 425 aaKnown RBP19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 CYP4F8P98187 520 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 WASHC5Q12768 1159 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 RAB30Q15771 203 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 KYNUQ16719 465 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 SYCP2LQ5T4T6 812 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 ITPRIPL1Q6GPH6 555 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 ZNF354CQ86Y25 554 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 ARHGAP12Q8IWW6 846 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 ZBED8Q8IZ13 594 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 ZNF567Q8N184 647 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 UMODL1-AS1Q8N2C9 162 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 SLC22A17Q8WUG5 538 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 DEPDC1BQ8WUY9 529 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 CYP2S1Q96SQ9 504 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 PBX4Q9BYU1 374 aa19.19■□□□□ 0.66
TNFSF9-201ENST00000245817 GBF1Q92538 1859 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 GOLGA8KD6RF30 607 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 XYLBO75191 536 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 CNTN5O94779 1100 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 TMEM63AO94886 807 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 MYZAPP0CAP1 466 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 PTPN2P17706 415 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 OR1E1P30953 314 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 MAPKAPK2P49137 400 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 SEMA5AQ13591 1074 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 TEX44Q53QW1 395 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 ALFQ53S48 1182 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 GAREM2Q75VX8 874 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 CROCCP2Q86T23 111 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 TMC8Q8IU68 726 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 MAB21L3Q8N8X9 362 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 OR2W6PQ8NHA6 318 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 CEP41Q9BYV8 373 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 NDFIP2Q9NV92 336 aa19.18■□□□□ 0.66
TNFSF9-201ENST00000245817 TRAV19A0A0A6YYK7 116 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 A0A1W2PRU2 124 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 ALOX15BO15296 676 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 CLASP2O75122 1294 aaKnown RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 LATS1O95835 1130 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 SYF2O95926 243 aaKnown RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 CKMP06732 381 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 PFKLP17858 780 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 TPSB2P20231 275 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 PBX2P40425 430 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 MAGEA6P43360 314 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 PAPOLAP51003 745 aaKnown RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 CDK16Q00536 496 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 CAMK1Q14012 370 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 TPSAB1Q15661 275 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 ANO4Q32M45 955 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 LRIT3Q3SXY7 679 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 FAM182AQ5T1J6 154 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 ARTNQ5T4W7 220 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 ADGRF1Q5T601 910 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 AFMIDQ63HM1 303 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 RFWD3Q6PCD5 774 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 MCUQ8NE86 351 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 PYROXD1Q8WU10 500 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 C9orf72Q96LT7 481 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 CCDC77Q9BR77 488 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 LRRC3Q9BY71 257 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 NINJ2Q9NZG7 142 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 IGSF9Q9P2J2 1179 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 RSPH14Q9UHP6 348 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 LSM7Q9UK45 103 aaKnown RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 AGO1Q9UL18 857 aaKnown RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 CPQQ9Y646 472 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 TRIOBPQ9H2D6 2365 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 H3BQF6 201 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 MATN3O15232 486 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 MAFKO60675 156 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 RAMP2O60895 175 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 JCHAINP01591 159 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 HNRNPA1P09651 372 aaKnown RBP eCLIP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 CCNB1P14635 433 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 HOXA9P31269 272 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 PRPSAP1Q14558 356 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 POLD3Q15054 466 aaPredicted RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 BBS9Q3SYG4 887 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 FAM133BQ5BKY9 247 aaKnown RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 FNBP1LQ5T0N5 605 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 UHMK1Q8TAS1 419 aaKnown RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 NSMCE1Q8WV22 266 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 AGAP3Q96P47 875 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 SH3GL2Q99962 352 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 EPB41L4BQ9H329 900 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 CENPHQ9H3R5 247 aa19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 IPO11Q9UI26 975 aaKnown RBP19.17■□□□□ 0.66
TNFSF9-201ENST00000245817 YBX2Q9Y2T7 364 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms