RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 OSCP1Q8WVF1 389 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 TUT1Q9H6E5 874 aaKnown RBP20.21■□□□□ 0.83
SOX4-201ENST00000244745 PCDHAC2Q9Y5I4 1007 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 TMEM26Q6ZUK4 368 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 SLC44A2Q8IWA5 706 aaPredicted RBP20.21■□□□□ 0.83
SOX4-201ENST00000244745 ATG16L2Q8NAA4 619 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 TSPAN14Q8NG11 270 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 RNF145Q96MT1 663 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 MECRQ9BV79 373 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 TMEM134Q9H6X4 195 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 AVILO75366 819 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 SCNN1BP51168 640 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 ZNF143P52747 638 aaPredicted RBP20.21■□□□□ 0.83
SOX4-201ENST00000244745 POLG2Q9UHN1 485 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 DSEQ9UL01 958 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 MLNP12872 115 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 HYIQ5T013 277 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 DNAJB3Q8WWF6 145 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 DCCP43146 1447 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 ADCY6O43306 1168 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 RHOCP08134 193 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 FGRP09769 529 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 HSMCR30P0CW71 290 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 RNF220Q5VTB9 566 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 KCNH4Q9UQ05 1017 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 CBX4O00257 560 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 TGFB3P10600 412 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 PCNAP12004 261 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 DGUOKQ16854 277 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 SLC27A1Q6PCB7 646 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 ZNF398Q8TD17 642 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 BDH2Q9BUT1 245 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 ZFYVE28Q9HCC9 887 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 POU1F1P28069 291 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 PBLDP30039 288 aaPredicted RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 LRPAP1P30533 357 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 CXCL9Q07325 125 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 POLD3Q15054 466 aaPredicted RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 UGCGQ16739 394 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 ZNF618Q5T7W0 954 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 OLFML1Q6UWY5 402 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 ZNF467Q7Z7K2 595 aaPredicted RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 SMAD5Q99717 465 aaKnown RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 C1orf50Q9BV19 199 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 SLC17A7Q9P2U7 560 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 FZD1Q9UP38 647 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 ASTN2O75129 1339 aaPredicted RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 LDLRP01130 860 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 NFICP08651 508 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 TRIP4Q15650 581 aaPredicted RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 CTXN3Q4LDR2 81 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 TUBGCP4Q9UGJ1 667 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 A0A0A0MRY4 1105 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 SMIM31A0A1B0GVY4 71 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 ALDH6A1Q02252 535 aaKnown RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 ZC3H12AQ5D1E8 599 aaKnown RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 PLEKHH3Q7Z736 793 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 SPATA13Q96N96 652 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 TKTL2Q9H0I9 626 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 PARVBQ9HBI1 364 aa20.2■□□□□ 0.82
SOX4-201ENST00000244745 FBXO6Q9NRD1 293 aaPredicted RBP20.2■□□□□ 0.82
SOX4-201ENST00000244745 ARHGAP17Q68EM7 881 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 FOXR2Q6PJQ5 311 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 TRABD2AQ86V40 505 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 FAM84AQ96KN4 292 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 PLEKHG4BQ96PX9 1271 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 C9orf16Q9BUW7 83 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 SNRNP25Q9BV90 132 aaKnown RBP20.19■□□□□ 0.82
SOX4-201ENST00000244745 DPY30Q9C005 99 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 PHACTR1Q9C0D0 580 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 CACNA2D2Q9NY47 1150 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 POMCP01189 267 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 MBL2P11226 248 aaPredicted RBP20.19■□□□□ 0.82
SOX4-201ENST00000244745 RPL5P46777 297 aaKnown RBP20.19■□□□□ 0.82
SOX4-201ENST00000244745 FOLH1Q04609 750 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 CDC16Q13042 620 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 RGS21Q2M5E4 152 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 DLG3Q92796 817 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 SPATA16Q9BXB7 569 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 PRKD2Q9BZL6 878 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 PLGRKTQ9HBL7 147 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 COG5Q9UP83 839 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 FOXO6A8MYZ6 492 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 HS6ST1O60243 411 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 MFN2O95140 757 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 HPCAP84074 193 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 NR1D2Q14995 579 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 SAMD4BQ5PRF9 694 aaKnown RBP20.19■□□□□ 0.82
SOX4-201ENST00000244745 PSTKQ8IV42 348 aaKnown RBP20.19■□□□□ 0.82
SOX4-201ENST00000244745 LYPLA1O75608 230 aaPredicted RBP20.19■□□□□ 0.82
SOX4-201ENST00000244745 ITGALP20701 1170 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 RRM2P31350 389 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 OAZ1P54368 228 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 B3GALNT2Q8NCR0 500 aa20.19■□□□□ 0.82
SOX4-201ENST00000244745 RNF157Q96PX1 679 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms