RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 DDR2Q16832 855 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 DHDDSQ86SQ9 333 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.65□□□□□ -1.188e-7■■■■■ 32.1
RIF1-201ENST00000243326 AKT1S1Q96B36 256 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 PHACTR1Q9C0D0 580 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 SLC24A2Q9UI40 661 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 AFF2P51816 1311 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 ASB14A6NK59 587 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 STX7O15400 261 aaKnown RBP7.65□□□□□ -1.18
RIF1-201ENST00000243326 KHDC1Q4VXA5 237 aaKnown RBP7.65□□□□□ -1.18
RIF1-201ENST00000243326 PAGE2Q7Z2X7 111 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 ZNF554Q86TJ5 538 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 TNIP2Q8NFZ5 429 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 ALG3Q92685 438 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 NFKBIL1Q9UBC1 381 aaPredicted RBP7.65□□□□□ -1.18
RIF1-201ENST00000243326 TBX3O15119 743 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 TRIM13O60858 407 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 UNC5CO95185 931 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 CSF1RP07333 972 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 AQP4P55087 323 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 LDB1Q86U70 411 aaPredicted RBP7.65□□□□□ -1.18
RIF1-201ENST00000243326 CYP4X1Q8N118 509 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 EXD2Q9NVH0 621 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 SMPD4Q9NXE4 827 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 FAM50BQ9Y247 325 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 EFNA1P20827 205 aaPredicted RBP7.65□□□□□ -1.18
RIF1-201ENST00000243326 NEK3P51956 506 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 NAGLUP54802 743 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 TRIM74Q86UV6 250 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 TRIM73Q86UV7 250 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 TERB1Q8NA31 727 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 VPS33BQ9H267 617 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 ACOT9Q9Y305 439 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 ASTN1O14525 1302 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 DDTLA6NHG4 134 aaPredicted RBP7.65□□□□□ -1.18
RIF1-201ENST00000243326 AGPSO00116 658 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 CBX4O00257 560 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 PEX2P28328 305 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 SDHAF4Q5VUM1 108 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 EZH1Q92800 747 aaPredicted RBP7.65□□□□□ -1.18
RIF1-201ENST00000243326 KCNS3Q9BQ31 491 aa7.65□□□□□ -1.18
RIF1-201ENST00000243326 LIN28AQ9H9Z2 209 aaKnown RBP7.65□□□□□ -1.18
RIF1-201ENST00000243326 TCRBV5S4A2TA0A5A2 114 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 SMAD9O15198 467 aaKnown RBP7.65□□□□□ -1.19
RIF1-201ENST00000243326 HIST1H2AGP0C0S8 130 aaPredicted RBP7.65□□□□□ -1.19
RIF1-201ENST00000243326 MLNP12872 115 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 TCF3P15923 654 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 HIST1H2ADP20671 130 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 TNFSF9P41273 254 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 ARHGEF7Q14155 803 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 GHDCQ8N2G8 530 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 HIST1H2AHQ96KK5 128 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 MED15Q96RN5 788 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 HIST1H2AJQ99878 128 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 LPIN3Q9BQK8 851 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 H2AFJQ9BTM1 129 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 ZNF395Q9H8N7 513 aaPredicted RBP7.65□□□□□ -1.19
RIF1-201ENST00000243326 RASSF1Q9NS23 344 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 TNS3Q68CZ2 1445 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 NTRK1P04629 796 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 AMPD2Q01433 879 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 ROR2Q01974 943 aaKnown RBP7.65□□□□□ -1.19
RIF1-201ENST00000243326 DLG2Q15700 870 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 BRINP3Q76B58 766 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 SV2AQ7L0J3 742 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 SLC35C1Q96A29 364 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 CERS2Q96G23 380 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 RHBGQ9H310 441 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 FANCEQ9HB96 536 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 A1CFQ9NQ94 594 aaKnown RBP7.65□□□□□ -1.19
RIF1-201ENST00000243326 NCKIPSDQ9NZQ3 722 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 TSPAN16Q9UKR8 245 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 HES2Q9Y543 173 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 DGAT1O75907 488 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 AZGP1P25311 298 aaKnown RBP7.65□□□□□ -1.19
RIF1-201ENST00000243326 CASP9P55211 416 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 GRIK3Q13003 919 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 RFX4Q33E94 735 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 CHMP1BQ7LBR1 199 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 GATAD2AQ86YP4 633 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 PIGKQ92643 395 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 TRPV5Q9NQA5 729 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 NR2E1Q9Y466 385 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 AQP1P29972 269 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 MCRS1Q96EZ8 462 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.65□□□□□ -1.191e-7■■■■□ 20.8
RIF1-201ENST00000243326 REREQ9P2R6 1566 aa7.65□□□□□ -1.19
RIF1-201ENST00000243326 A0A0A6YYK5 440 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 USP17L7P0C7H9 530 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 NT5C2P49902 561 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 MGAT5Q09328 741 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 CCSAPQ6IQ19 270 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 TTC23LQ6PF05 361 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 DOK6Q6PKX4 331 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PTF1AQ7RTS3 328 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 BBS7Q8IWZ6 715 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 DENND2DQ9H6A0 471 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 SESN1Q9Y6P5 492 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 KANSL1LA0AUZ9 987 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 SMIM30A4D0T7 59 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms