RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ITPRIPL1Q6GPH6 555 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 FAM47EQ6ZV65 393 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 TAS1R1Q7RTX1 841 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 CNTD1Q8N815 330 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 TMEM175Q9BSA9 504 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 NAT9Q9BTE0 207 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 KDM4CQ9H3R0 1056 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 NDFIP2Q9NV92 336 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 PRKAG3Q9UGI9 489 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 OGDHLQ9ULD0 1010 aa18.93■□□□□ 0.62
HOXC11-201ENST00000243082 SCN5AQ14524 2016 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 E9PAM4 449 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 DFFAO00273 331 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 USP12O75317 370 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 RFPL1O75677 317 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 CXCL10P02778 98 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 CPB1P15086 417 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 CCNCP24863 283 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 ETV4P43268 484 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 MAGEA9P43362 315 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 LIG3P49916 1009 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 TUBP50607 506 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 CCL23P55773 120 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 NIPAL4Q0D2K0 466 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 BMPR2Q13873 1038 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 CRYMQ14894 314 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 RNF19BQ6ZMZ0 732 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 LZTR1Q8N653 840 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 BCL7CQ8WUZ0 217 aaPredicted RBP18.92■□□□□ 0.62
HOXC11-201ENST00000243082 ZNF75CPQ92670 426 aaPredicted RBP18.92■□□□□ 0.62
HOXC11-201ENST00000243082 C1orf74Q96LT6 269 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 MRPL9Q9BYD2 267 aaKnown RBP18.92■□□□□ 0.62
HOXC11-201ENST00000243082 SLC39A8Q9C0K1 460 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 CASS4Q9NQ75 786 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 SHROOM3Q8TF72 1996 aa18.92■□□□□ 0.62
HOXC11-201ENST00000243082 ARHGAP42A6NI28 874 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 ERI2A8K979 691 aaKnown RBP18.91■□□□□ 0.62
HOXC11-201ENST00000243082 KRT38O76015 456 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 DHRS4L1P0CG22 281 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 YWHAQP27348 245 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 SEPT7Q16181 437 aaKnown RBP18.91■□□□□ 0.62
HOXC11-201ENST00000243082 LACTB2Q53H82 288 aaPredicted RBP18.91■□□□□ 0.62
HOXC11-201ENST00000243082 PIK3R6Q5UE93 754 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 LRRC8CQ8TDW0 803 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 GRAMD1AQ96CP6 724 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 SLCO1B3Q9NPD5 702 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 TMEM51Q9NW97 253 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 MRPL42Q9Y6G3 142 aaKnown RBP18.91■□□□□ 0.62
HOXC11-201ENST00000243082 CACNG3O60359 315 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 MAFKO60675 156 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 ATN1P54259 1190 aaPredicted RBP18.91■□□□□ 0.62
HOXC11-201ENST00000243082 TBX4P57082 545 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 ELAVL2Q12926 359 aaKnown RBP18.91■□□□□ 0.62
HOXC11-201ENST00000243082 AFMIDQ63HM1 303 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 MARK2Q7KZI7 788 aaKnown RBP18.91■□□□□ 0.62
HOXC11-201ENST00000243082 KLHDC8BQ8IXV7 354 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 SPPL2BQ8TCT7 592 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 FBXO32Q969P5 355 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 MTBPQ96DY7 904 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 VPS11Q9H270 941 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 HIPK3Q9H422 1215 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 MPP6Q9NZW5 540 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 PHTF1Q9UMS5 762 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 STARD13Q9Y3M8 1113 aa18.91■□□□□ 0.62
HOXC11-201ENST00000243082 RTN3O95197 1032 aaPredicted RBP18.9■□□□□ 0.62
HOXC11-201ENST00000243082 TBX18O95935 607 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 ALADP13716 330 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 CCNB1P14635 433 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 CCNFP41002 786 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 SERPINB9P50453 376 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 MGAT5BQ3V5L5 792 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 RASIP1Q5U651 963 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 CDHR3Q6ZTQ4 885 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 TRPM8Q7Z2W7 1104 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 ZNF683Q8IZ20 524 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 ATPAF2Q8N5M1 289 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 RTL3Q8N8U3 475 aaKnown RBP18.9■□□□□ 0.62
HOXC11-201ENST00000243082 USP33Q8TEY7 942 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 ZNF419Q96HQ0 510 aaPredicted RBP18.9■□□□□ 0.62
HOXC11-201ENST00000243082 SPATA17Q96L03 361 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.9■□□□□ 0.62
HOXC11-201ENST00000243082 CLIC5Q9NZA1 410 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 SLC17A6Q9P2U8 582 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 ARL2BPQ9Y2Y0 163 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.9■□□□□ 0.62
HOXC11-201ENST00000243082 WASH4PA8MWX3 477 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 H7C4K7 107 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 EDF1O60869 148 aaKnown RBP18.9■□□□□ 0.62
HOXC11-201ENST00000243082 FSBPO95073 299 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 POLBP06746 335 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 HAPLN1P10915 354 aaPredicted RBP18.9■□□□□ 0.62
HOXC11-201ENST00000243082 SLC2A3P11169 496 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 EFEMP1Q12805 493 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 SMARCB1Q12824 385 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 TAF10Q12962 218 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 MROH9Q5TGP6 573 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 CES3Q6UWW8 571 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 OTOP3Q7RTS5 596 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 ANKRD33Q7Z3H0 272 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 FCRL3Q96P31 734 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms