RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ARHGAP40Q5TG30 622 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 PIK3R6Q5UE93 754 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3GQ6DHY5 549 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 PM20D1Q6GTS8 502 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3CQ6IPX1 549 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 SPATS2Q86XZ4 545 aaKnown RBP14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3Q8IZP1 549 aaPredicted RBP14.29□□□□□ -0.12
DDX39A-201ENST00000242776 SIX6OS1Q8N1H7 587 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 STK40Q8N2I9 435 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 AADATQ8N5Z0 425 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 THAP9Q9H5L6 903 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 CAAP1Q9H8G2 361 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 CBX8Q9HC52 389 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TSPAN16Q9UKR8 245 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 INTS6Q9UL03 887 aaKnown RBP14.29□□□□□ -0.12
DDX39A-201ENST00000242776 CA5BQ9Y2D0 317 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 PCDHB1Q9Y5F3 818 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 CFAP46Q8IYW2 2715 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 ATMQ13315 3056 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 SLC16A3O15427 465 aaKnown RBP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 GNA14O95837 355 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 IL1BP01584 269 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 CKMT2P17540 419 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 METAP1P53582 386 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 RPS24P62847 133 aaKnown RBP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 LY6DQ14210 128 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 HNRNPA1L2Q32P51 320 aaKnown RBP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D25Q3MII6 688 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 FAM133BQ5BKY9 247 aaKnown RBP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 FSCBQ5H9T9 825 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 C9orf64Q5T6V5 341 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 ARHGAP17Q68EM7 881 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 ERICH1Q86X53 443 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 RPL10LQ96L21 214 aaKnown RBP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 MRGPRX3Q96LB0 322 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 PRICKLE1Q96MT3 831 aaPredicted RBP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 SRRTQ9BXP5 876 aaKnown RBP14.28□□□□□ -0.12
DDX39A-201ENST00000242776 UBXN6Q9BZV1 441 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 TMEM8AQ9HCN3 771 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 SLCO3A1Q9UIG8 710 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 STOML2Q9UJZ1 356 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 SCML1Q9UN30 329 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 ERVW-1Q9UQF0 538 aa14.28□□□□□ -0.12
DDX39A-201ENST00000242776 XPO1O14980 1071 aaKnown RBP14.27□□□□□ -0.12
DDX39A-201ENST00000242776 MAPK13O15264 365 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 MOCS2O96007 188 aaPredicted RBP14.27□□□□□ -0.12
DDX39A-201ENST00000242776 MPOP05164 745 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 CDK4P11802 303 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 MYF5P13349 255 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 VAV1P15498 845 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 PSMC2P35998 433 aaKnown RBP14.27□□□□□ -0.12
DDX39A-201ENST00000242776 SLC11A2P49281 568 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 ADPRHP54922 357 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 DAB2P98082 770 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 CDH18Q13634 790 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 IQCB1Q15051 598 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 CCDC40Q4G0X9 1142 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 SLC45A4Q5BKX6 768 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 NADSYN1Q6IA69 706 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.12
DDX39A-201ENST00000242776 SND1Q7KZF4 910 aaKnown RBP eCLIP14.27□□□□□ -0.12
DDX39A-201ENST00000242776 TMC6Q7Z403 805 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 ANKRD20A12PQ8NF67 263 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 MYOCQ99972 504 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 SEMA4CQ9C0C4 833 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 ABCC13Q9NSE7 274 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 HESX1Q9UBX0 185 aa14.27□□□□□ -0.12
DDX39A-201ENST00000242776 YKT6O15498 198 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 FFAR2O15552 330 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 SIGLEC6O43699 453 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 ACSL4O60488 711 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 MT-CO3P00414 261 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 GOT1P17174 413 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 STK19P49842 368 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-201ENST00000242776 CCR5P51681 352 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 TBX4P57082 545 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 BST2Q10589 180 aaKnown RBP14.26□□□□□ -0.13
DDX39A-201ENST00000242776 SFSWAPQ12872 951 aaKnown RBP14.26□□□□□ -0.13
DDX39A-201ENST00000242776 SGO2Q562F6 1265 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 PITRM1Q5JRX3 1037 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 KRT39Q6A163 491 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 LUZP1Q86V48 1076 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 LSM14AQ8ND56 463 aaKnown RBP14.26□□□□□ -0.13
DDX39A-201ENST00000242776 CLEC4CQ8WTT0 213 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 TTC17Q96AE7 1141 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 LMLNQ96KR4 655 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 MED15Q96RN5 788 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 FAM129BQ96TA1 746 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 OSBPL2Q9H1P3 480 aa14.26□□□□□ -0.13
DDX39A-201ENST00000242776 METTL14Q9HCE5 456 aaKnown RBP14.26□□□□□ -0.13
DDX39A-201ENST00000242776 TRIM38O00635 465 aa14.25□□□□□ -0.13
DDX39A-201ENST00000242776 RTN2O75298 545 aa14.25□□□□□ -0.13
DDX39A-201ENST00000242776 LATS1O95835 1130 aa14.25□□□□□ -0.13
DDX39A-201ENST00000242776 CALCAP01258 141 aa14.25□□□□□ -0.13
DDX39A-201ENST00000242776 ASLP04424 464 aa14.25□□□□□ -0.13
DDX39A-201ENST00000242776 C7P10643 843 aa14.25□□□□□ -0.13
DDX39A-201ENST00000242776 MXI1P50539 228 aa14.25□□□□□ -0.13
DDX39A-201ENST00000242776 DAOAP59103 153 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms