RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 PCDH19Q8TAB3 1148 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 MICAL1Q8TDZ2 1067 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 AENQ8WTP8 325 aaKnown RBP10.05□□□□□ -0.8
TTC1-201ENST00000231238 CASP10Q92851 521 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 NKD2Q969F2 451 aaPredicted RBP10.05□□□□□ -0.8
TTC1-201ENST00000231238 CEP295NLQ96MC4 621 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 EMILIN2Q9BXX0 1053 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 NMUR1Q9HB89 426 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 PRDM6Q9NQX0 595 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 CLIC5Q9NZA1 410 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 TRPM5Q9NZQ8 1165 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 CWC15Q9P013 229 aaKnown RBP10.05□□□□□ -0.8
TTC1-201ENST00000231238 CALCOCO1Q9P1Z2 691 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 RWDD3Q9Y3V2 267 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 YIPF1Q9Y548 306 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 BRCA2P51587 3418 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 LTBP2Q14767 1821 aa10.05□□□□□ -0.8
TTC1-201ENST00000231238 CFAP69A5D8W1 941 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 KCNN4O15554 427 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 HMBSP08397 361 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 SRGAP2BP0DMP2 458 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 PECAM1P16284 738 aaPredicted RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 KLRC2P26717 231 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 EPHB2P29323 1055 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 STIP1P31948 543 aaKnown RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 SERPINB6P35237 376 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 RPL21P46778 160 aaKnown RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 NR2C2P49116 596 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 DRG2P55039 364 aaKnown RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 HTRA4P83105 476 aaPredicted RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 CAV1Q03135 178 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 RAB33AQ14088 237 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 NOMO1Q15155 1222 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 TRADDQ15628 312 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 P3H1Q32P28 736 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 CFAP58Q5T655 872 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 OTUD1Q5VV17 481 aaPredicted RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 IZUMO3Q5VZ72 239 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 SLC9A4Q6AI14 798 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 CEP128Q6ZU80 1094 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 RFX8Q6ZV50 586 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 ITIH5Q86UX2 942 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 RNF168Q8IYW5 571 aaPredicted RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 ELMOD1Q8N336 334 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 ALLCQ8N6M5 410 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 ATP6V0D2Q8N8Y2 350 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 CCNYQ8ND76 341 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 UBLCP1Q8WVY7 318 aaPredicted RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 CAVIN3Q969G5 261 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 TCF25Q9BQ70 676 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 FAM129AQ9BZQ8 928 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 TSPYL1Q9H0U9 437 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 WDR6Q9NNW5 1121 aaKnown RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 ZNF446Q9NWS9 450 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 MARCH2Q9P0N8 246 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 WHRNQ9P202 907 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 HSFX1Q9UBD0 423 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 UXTQ9UBK9 157 aaPredicted RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 OR12D3Q9UGF7 316 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 VWA8A3KMH1 1905 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 SLC12A8A0AV02 714 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 PPP1R12AO14974 1030 aaPredicted RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 TEX28O15482 410 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 TLR5O60602 858 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 ABLIM3O94929 683 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 SEC24AO95486 1093 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 LRG1P02750 347 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 CTSAP10619 480 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 ATF6P18850 670 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 KPNA1P52294 538 aaPredicted RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 SCAPQ12770 1279 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 TWF1Q12792 350 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 PLA2G4EQ3MJ16 856 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 PLPP4Q5VZY2 271 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 HEATR6Q6AI08 1181 aaKnown RBP10.04□□□□□ -0.8
TTC1-201ENST00000231238 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 CCDC149Q6ZUS6 474 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 PQLC3Q8N755 202 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 FAM71DQ8N9W8 422 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 SLC35B2Q8TB61 432 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 FAF2Q96CS3 445 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 GCNAQ96QF7 691 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 FUT8Q9BYC5 575 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 PCDH9Q9HC56 1237 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 ARHGEF4Q9NR80 690 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 FNIP2Q9P278 1114 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 MAFFQ9ULX9 164 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 TLR6Q9Y2C9 796 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 NR2E3Q9Y5X4 410 aa10.04□□□□□ -0.8
TTC1-201ENST00000231238 GOLGA6BA6NDN3 693 aa10.03□□□□□ -0.8
TTC1-201ENST00000231238 MMP20O60882 483 aa10.03□□□□□ -0.8
TTC1-201ENST00000231238 PAGE1O75459 146 aa10.03□□□□□ -0.8
TTC1-201ENST00000231238 ZNF189O75820 626 aaPredicted RBP10.03□□□□□ -0.8
TTC1-201ENST00000231238 VNN2O95498 520 aa10.03□□□□□ -0.8
TTC1-201ENST00000231238 EFEMP2O95967 443 aa10.03□□□□□ -0.8
TTC1-201ENST00000231238 FAM153BP0C7A2 387 aa10.03□□□□□ -0.8
TTC1-201ENST00000231238 SPATA31D3P0C874 917 aa10.03□□□□□ -0.8
TTC1-201ENST00000231238 ZSCAN5DPP0CG00 497 aa10.03□□□□□ -0.8
TTC1-201ENST00000231238 NID1P14543 1247 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms