RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SEMA4AQ9H3S1 761 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 PARD6AQ9NPB6 346 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 PRSS16Q9NQE7 514 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 ABHD10Q9NUJ1 306 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 BZW2Q9Y6E2 419 aaKnown RBP14.14□□□□□ -0.15
VEGFA-201ENST00000230480 CACNA1EQ15878 2313 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 TCRBV21S2A2A0A5A6 115 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 CBFA2T2O43439 604 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 LRIG2O94898 1065 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 MT-CO1P00395 513 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 LMNAP02545 664 aaKnown RBP14.13□□□□□ -0.15
VEGFA-201ENST00000230480 VAV1P15498 845 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 IL1R2P27930 398 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 STK19P49842 368 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-201ENST00000230480 GALCP54803 685 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 PLK5Q496M5 336 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 PREPLQ4J6C6 727 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-201ENST00000230480 TXNRD3NBQ6F5E7 133 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 ALKBH5Q6P6C2 394 aaKnown RBP14.13□□□□□ -0.15
VEGFA-201ENST00000230480 CCDC26Q8TAB7 109 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 FRS2Q8WU20 508 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 HMGB4Q8WW32 186 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 BTBD6Q96KE9 485 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 KLC2Q9H0B6 622 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 GPATCH2LQ9NWQ4 482 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 KIAA1522Q9P206 1035 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-201ENST00000230480 PPARGC1AQ9UBK2 798 aaKnown RBP14.13□□□□□ -0.15
VEGFA-201ENST00000230480 OR12D3Q9UGF7 316 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 SLC12A6Q9UHW9 1150 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 FZD10Q9ULW2 581 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 SMG5Q9UPR3 1016 aaKnown RBP14.13□□□□□ -0.15
VEGFA-201ENST00000230480 ERVW-1Q9UQF0 538 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 ACTL7AQ9Y615 435 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 DMXL1Q9Y485 3027 aa14.13□□□□□ -0.15
VEGFA-201ENST00000230480 TTC34A8MYJ7 566 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 H0Y626 953 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 SNAP91O60641 907 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 ZNF821O75541 412 aaPredicted RBP14.12□□□□□ -0.15
VEGFA-201ENST00000230480 GLDCP23378 1020 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 CNR2P34972 360 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 CDH4P55283 916 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 TDRD12Q587J7 1177 aaKnown RBP14.12□□□□□ -0.15
VEGFA-201ENST00000230480 C9orf64Q5T6V5 341 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 TMC6Q7Z403 805 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 OR7D4Q8NG98 312 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 FNIP1Q8TF40 1166 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 PTPRN2Q92932 1015 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 ZNF653Q96CK0 615 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 RPL10LQ96L21 214 aaKnown RBP14.12□□□□□ -0.15
VEGFA-201ENST00000230480 FAM129BQ96TA1 746 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 PARVAQ9NVD7 372 aa14.12□□□□□ -0.15
VEGFA-201ENST00000230480 IGHV1OR15-9A0A0B4J2B8 117 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 SSU72P8A0A1W2PR75 194 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 K7ERQ8 282 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 NPC1O15118 1278 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 SRGAP2O75044 1071 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 LRCH4O75427 683 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 CLDN11O75508 207 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 RPP40O75818 363 aaKnown RBP14.11□□□□□ -0.15
VEGFA-201ENST00000230480 FECHP22830 423 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 VASPP50552 380 aaPredicted RBP14.11□□□□□ -0.15
VEGFA-201ENST00000230480 CDH18Q13634 790 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 SIM2Q14190 667 aaPredicted RBP14.11□□□□□ -0.15
VEGFA-201ENST00000230480 SLC18A3Q16572 532 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 RABGAP1LQ5R372 815 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 CCDC122Q5T0U0 273 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 TTC39BQ5VTQ0 682 aaPredicted RBP14.11□□□□□ -0.15
VEGFA-201ENST00000230480 RNF219Q5W0B1 726 aaPredicted RBP14.11□□□□□ -0.15
VEGFA-201ENST00000230480 ZC3H14Q6PJT7 736 aaKnown RBP14.11□□□□□ -0.15
VEGFA-201ENST00000230480 TFAP2DQ7Z6R9 452 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 METTL3Q86U44 580 aaKnown RBP14.11□□□□□ -0.15
VEGFA-201ENST00000230480 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.11□□□□□ -0.15
VEGFA-201ENST00000230480 TRIM5Q9C035 493 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 MYO1AQ9UBC5 1043 aa14.11□□□□□ -0.15
VEGFA-201ENST00000230480 CNOT1A5YKK6 2376 aaKnown RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 SMAD6O43541 496 aaKnown RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 SIN3BO75182 1162 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 EPHX1P07099 455 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 POLR2EP19388 210 aaKnown RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 PSMA2P25787 234 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 MIPP30301 263 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 L1CAMP32004 1257 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 ACVRL1P37023 503 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 METAP1P53582 386 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 TERF1P54274 439 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 MTA1Q13330 715 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 HNRNPA1L2Q32P51 320 aaKnown RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 DCUN1D2Q6PH85 259 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 NUDT18Q6ZVK8 323 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 SND1Q7KZF4 910 aaKnown RBP eCLIP14.1□□□□□ -0.154e-9■■□□□ 11.9
VEGFA-201ENST00000230480 TRMT11Q7Z4G4 463 aaKnown RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 SLFN11Q7Z7L1 901 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 TMPRSS6Q8IU80 811 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 KDM1BQ8NB78 822 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 MRFAP1L1Q96HT8 127 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 KCTD15Q96SI1 283 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 SNRNP25Q9BV90 132 aaKnown RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 ACE2Q9BYF1 805 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 GRPEL1Q9HAV7 217 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 POLMQ9NP87 494 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms