RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TPP1O14773 563 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 MAGEA6P43360 314 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 SESN2P58004 480 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC6A3Q01959 620 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 TMEM132DQ14C87 1099 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 MYLK3Q32MK0 819 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 ANKDD1AQ495B1 522 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 DALRD3Q5D0E6 543 aaKnown RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 RNF111Q6ZNA4 994 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 ANKRD13AQ8IZ07 590 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 CCDC185Q8N715 623 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 C7orf31Q8N865 590 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 AGR3Q8TD06 166 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 GAB3Q8WWW8 586 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 CYP3A43Q9HB55 503 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 MTMR10Q9NXD2 777 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 MOCS1Q9NZB8 636 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PCDHGB4Q9UN71 923 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PCDHGB5Q9Y5G0 923 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PCDHA11Q9Y5I1 949 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 SERPINA6P08185 405 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 GSTT2P0CG29 244 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 GSTT2BP0CG30 244 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 FGF3P11487 239 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 CD1EP15812 388 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 MX2P20592 715 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 GTF2A2P52657 109 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PRAMEP78395 509 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 INCA1Q0VD86 236 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 VGLL4Q14135 290 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 EFHC1Q5JVL4 640 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 TEDDM1Q5T9Z0 273 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 MBLAC2Q68D91 279 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 LPCAT2Q7L5N7 544 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 FASTKD5Q7L8L6 764 aaKnown RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PLPPR4Q7Z2D5 763 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 NET1Q7Z628 596 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 MCUQ8NE86 351 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 NDRG1Q92597 394 aaKnown RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PPP1R36Q96LQ0 422 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 DRC3Q9H069 523 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 DPEP3Q9H4B8 488 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 THAP1Q9NVV9 213 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 HESX1Q9UBX0 185 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 SNX9Q9Y5X1 595 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZNF638Q14966 1978 aaKnown RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PDLIM1O00151 329 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 USP2O75604 605 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 SEC24DO94855 1032 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 C22orf31O95567 290 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PROCP04070 461 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 OCM2P0CE71 109 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 OCMP0CE72 109 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 COL6A2P12110 1019 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 INSRRP14616 1297 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 GOT1P17174 413 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 TCN1P20061 433 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 SOWAHAQ2M3V2 549 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 Q3C1V9 767 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 GADL1Q6ZQY3 521 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 PIWIL2Q8TC59 973 aaKnown RBP9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 THAP11Q96EK4 314 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 MOCOSQ96EN8 888 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 LRGUKQ96M69 825 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 VRTNQ9H8Y1 702 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 TXNRD2Q9NNW7 524 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 RRN3Q9NYV6 651 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 DTLQ9NZJ0 730 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 ADAMTS6Q9UKP5 1117 aa9.62□□□□□ -0.87
HLA-DOA-201ENST00000229829 F8W8V4 182 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 GAS2O43903 313 aaKnown RBP9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 GCATO75600 419 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 PRKCGP05129 697 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 ATICP31939 592 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC1A6P48664 564 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 WASHC5Q12768 1159 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 ANKRD20A4Q4UJ75 823 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 PKDCCQ504Y2 493 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 C6orf52Q5T4I8 152 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 C10orf107Q8IVU9 208 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 TP53INP2Q8IXH6 220 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 SIX5Q8N196 739 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 GABPB2Q8TAK5 448 aaPredicted RBP9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC35F5Q8WV83 523 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 ATXN7L3BQ96GX2 97 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZNF670Q9BS34 389 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 FRMD8Q9BZ67 464 aaPredicted RBP9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 Q9H521 79 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 ACSS2Q9NR19 701 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 MKS1Q9NXB0 559 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 AKT3Q9Y243 479 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 PLXNA1Q9UIW2 1896 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 VILLO15195 856 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 TXNP10599 105 aaKnown RBP9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 P4HA1P13674 534 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 LCP1P13796 627 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 MGAT1P26572 445 aa9.61□□□□□ -0.87
HLA-DOA-201ENST00000229829 CBLBQ13191 982 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms