RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 FASTKD1Q53R41 847 aaKnown RBP25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 SPANXN3Q5MJ09 141 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 CCDC185Q8N715 623 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 PDCD7Q8N8D1 485 aaKnown RBP25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 PPP1R14CQ8TAE6 165 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 PRR11Q96HE9 360 aaPredicted RBP25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 SLC9A7Q96T83 725 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 ZFATQ9P243 1243 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 LRCH1Q9Y2L9 728 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 H0Y3Z8 333 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 CXCL10P02778 98 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 SERPINE1P05121 402 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 CLTBP09497 229 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 LCP1P13796 627 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 VAV1P15498 845 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 NOS2P35228 1153 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 AP1B1Q10567 949 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 SV2CQ496J9 727 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 SNX30Q5VWJ9 437 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 MBLAC2Q68D91 279 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 CAPRIN2Q6IMN6 1127 aaKnown RBP25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 IRGCQ6NXR0 463 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 PIWIL2Q8TC59 973 aaKnown RBP25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 KCTD13Q8WZ19 329 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 HNRNPABQ99729 332 aaKnown RBP25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 BRD8Q9H0E9 1235 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 GPAMQ9HCL2 828 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 TMEM39AQ9NV64 488 aa25.51■■□□□ 1.67
RUNDC3A-201ENST00000225441 WDR27A2RRH5 827 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 PLIN3O60664 434 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 MAP3K6O95382 1288 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 ABL2P42684 1182 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 GRTP1Q5TC63 336 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 DENND5BQ6ZUT9 1274 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 SCUBE1Q8IWY4 988 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 APPL2Q8NEU8 664 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 ISL2Q96A47 359 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 DPEP3Q9H4B8 488 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 STAP1Q9ULZ2 295 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 PLA2G4CQ9UP65 541 aa25.5■■□□□ 1.67
RUNDC3A-201ENST00000225441 CYB561D2O14569 222 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 GOT1P17174 413 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 WARSP23381 471 aaKnown RBP25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 ADORA2BP29275 332 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 TAF6P49848 677 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 TREML1Q86YW5 311 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 TOP6BLQ8N6T0 577 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 CPNE1Q99829 537 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 NMRK1Q9NWW6 199 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 RNF103O00237 685 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 INPPL1O15357 1258 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 GSRP00390 522 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 POLBP06746 335 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 CCDC130P13994 396 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 SULT1E1P49888 294 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 ZNF135P52742 658 aaPredicted RBP25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 KLC1Q07866 573 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 TCTN1Q2MV58 587 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 CES4AQ5XG92 561 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 ANO7Q6IWH7 933 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 LRRC74BQ6ZQY2 392 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 PPP4R1Q8TF05 950 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 CLEC4CQ8WTT0 213 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 RNF139Q8WU17 664 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 ARNTL2Q8WYA1 636 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 OSBPL1AQ9BXW6 950 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 DUSP16Q9BY84 665 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 DNAJC28Q9NX36 388 aa25.49■■□□□ 1.67
RUNDC3A-201ENST00000225441 ENPP3O14638 875 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 CAPN9O14815 690 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 NCAM2O15394 837 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 ENO1P06733 434 aaKnown RBP25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 ALOX15P16050 662 aaPredicted RBP25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 GP5P40197 560 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 CCDC153Q494R4 210 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 CASC4Q6P4E1 433 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 DEFB106AQ8N104 65 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 RBM15BQ8NDT2 890 aaKnown RBP25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 MICAL1Q8TDZ2 1067 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 P2RY11Q96G91 374 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 RILPQ96NA2 401 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 NPY6RQ99463 290 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 ARMCX1Q9P291 453 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 INPP5FQ9Y2H2 1132 aa25.48■■□□□ 1.67
RUNDC3A-201ENST00000225441 ERI2A8K979 691 aaKnown RBP25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 MTSS1O43312 755 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 KRT36O76013 467 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 ALDOAP04075 364 aaKnown RBP25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 FGF3P11487 239 aaPredicted RBP25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 MX2P20592 715 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 GRIA1P42261 906 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 SLC1A6P48664 564 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 HCAR3P49019 387 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 GRIK3Q13003 919 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 INTS6LQ5JSJ4 861 aaKnown RBP25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 TEDDM1Q5T9Z0 273 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 N4BP2L1Q5TBK1 243 aaPredicted RBP25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 TMEM161AQ9NX61 479 aa25.47■■□□□ 1.67
RUNDC3A-201ENST00000225441 TXNDC16Q9P2K2 825 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms