RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 ARHGAP20Q9P2F6 1191 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 CYTH4Q9UIA0 394 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 TPX2Q9ULW0 747 aaKnown RBP16.28■□□□□ 0.2
NME3-201ENST00000219302 TLR4O00206 839 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 PLK4O00444 970 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 PSMA7O14818 248 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 ADH1BP00325 375 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 CDK4P11802 303 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 VAV1P15498 845 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 ABCB4P21439 1286 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 MZF1P28698 734 aaPredicted RBP16.27■□□□□ 0.2
NME3-201ENST00000219302 PSMD8P48556 350 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 ACADVLP49748 655 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 STK19P49842 368 aaPredicted RBP16.27■□□□□ 0.2
NME3-201ENST00000219302 PITX1P78337 314 aaPredicted RBP16.27■□□□□ 0.2
NME3-201ENST00000219302 BNIP3Q12983 259 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 SLC12A1Q13621 1099 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 TTI2Q6NXR4 508 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 KANSL1Q7Z3B3 1105 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 TMEM110Q86TL2 294 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 SPATS2Q86XZ4 545 aaKnown RBP16.27■□□□□ 0.2
NME3-201ENST00000219302 EID2Q8N6I1 236 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 FRS2Q8WU20 508 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 SERAC1Q96JX3 654 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 BTN2A3PQ96KV6 586 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 GDF3Q9NR23 364 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 ST7Q9NRC1 585 aa16.27■□□□□ 0.2
NME3-201ENST00000219302 TP53BP1Q12888 1972 aaPredicted RBP16.26■□□□□ 0.19
NME3-201ENST00000219302 YKT6O15498 198 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 RFPL3O75679 317 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 TRUB2O95900 331 aaKnown RBP16.26■□□□□ 0.19
NME3-201ENST00000219302 IL1BP01584 269 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 APOEP02649 317 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 JUPP14923 745 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 EPHA8P29322 1005 aaPredicted RBP16.26■□□□□ 0.19
NME3-201ENST00000219302 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
NME3-201ENST00000219302 METAP1P53582 386 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 PPP2CBP62714 309 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 PPP2CAP67775 309 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 CETN1Q12798 172 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 ELAVL3Q14576 367 aaKnown RBP16.26■□□□□ 0.19
NME3-201ENST00000219302 MEA1Q16626 185 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 CCDC40Q4G0X9 1142 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 SFMBT2Q5VUG0 894 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 ISM2Q6H9L7 571 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.26■□□□□ 0.19
NME3-201ENST00000219302 MFSD2AQ8NA29 543 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 ALG14Q96F25 216 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 TIGD1Q96MW7 591 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 POPDC2Q9HBU9 364 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 TJP2Q9UDY2 1190 aa16.26■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3DA0A087WVF3 549 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3IA0A087WXS9 549 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3EA0A087X179 549 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3KA0A087X1G2 549 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3FA6NER0 549 aaPredicted RBP16.25■□□□□ 0.19
NME3-201ENST00000219302 KCNU1A8MYU2 1149 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 PPP1R3GB7ZBB8 358 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3LB9A6J9 549 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 CAPN9O14815 690 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3HP0C7X1 549 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 BMP6P22004 513 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 ARRB1P49407 418 aaPredicted RBP16.25■□□□□ 0.19
NME3-201ENST00000219302 YWHAZP63104 245 aaKnown RBP16.25■□□□□ 0.19
NME3-201ENST00000219302 KCNH2Q12809 1159 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TARDBPQ13148 414 aaKnown RBP eCLIP16.25■□□□□ 0.19
NME3-201ENST00000219302 RTP5Q14D33 572 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TAF5Q15542 800 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 RNF219Q5W0B1 726 aaPredicted RBP16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3GQ6DHY5 549 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3CQ6IPX1 549 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 NAPEPLDQ6IQ20 393 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 CXorf57Q6NSI4 855 aaKnown RBP16.25■□□□□ 0.19
NME3-201ENST00000219302 FBXL19Q6PCT2 694 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 FOXR2Q6PJQ5 311 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 CHSY1Q86X52 802 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TRIM59Q8IWR1 403 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TBC1D3Q8IZP1 549 aaPredicted RBP16.25■□□□□ 0.19
NME3-201ENST00000219302 CCAR2Q8N163 923 aaKnown RBP16.25■□□□□ 0.19
NME3-201ENST00000219302 ZNF606Q8WXB4 792 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 TRIM62Q9BVG3 475 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 KDM4CQ9H3R0 1056 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 THAP9Q9H5L6 903 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.19
NME3-201ENST00000219302 MAN1B1Q9UKM7 699 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 SARDHQ9UL12 918 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 CEP83Q9Y592 693 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 DOCK9Q9BZ29 2069 aa16.25■□□□□ 0.19
NME3-201ENST00000219302 E5RJQ4 531 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 SLC7A4O43246 635 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 TLX3O43711 291 aaPredicted RBP16.24■□□□□ 0.19
NME3-201ENST00000219302 RTN2O75298 545 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 PDGFRAP16234 1089 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 ITPKBP27987 946 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 NNMTP40261 264 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 EIF2S3P41091 472 aaKnown RBP16.24■□□□□ 0.19
NME3-201ENST00000219302 NUMBP49757 651 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 SULT2A1Q06520 285 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 STIM1Q13586 685 aa16.24■□□□□ 0.19
NME3-201ENST00000219302 SLC45A4Q5BKX6 768 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms