RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 NAPRTQ6XQN6 538 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 STRA8Q7Z7C7 330 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 FBXW8Q8N3Y1 598 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 ZFAND2BQ8WV99 257 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 KBTBD7Q8WVZ9 684 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 JADE3Q92613 823 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 MAML3Q96JK9 1138 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 SNX27Q96L92 541 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 EIF2AQ9BY44 585 aaKnown RBP17.67■□□□□ 0.42
USB1-201ENST00000219281 CDH19Q9H159 772 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 PLEKHA5Q9HAU0 1116 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 PCDHB12Q9Y5F1 795 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 SF3B1O75533 1304 aaKnown RBP eCLIP17.67■□□□□ 0.42
USB1-201ENST00000219281 KCNK1O00180 336 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 SNUPNO95149 360 aaKnown RBP17.67■□□□□ 0.42
USB1-201ENST00000219281 ACADSBP45954 432 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 RPL34P49207 117 aaKnown RBP17.67■□□□□ 0.42
USB1-201ENST00000219281 AQP4P55087 323 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 TMEM62Q0P6H9 643 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 GRB14Q14449 540 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 PDK1Q15118 436 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 ZBTB6Q15916 424 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 KIZQ2M2Z5 673 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 SLC25A52Q3SY17 297 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 DCAF6Q58WW2 860 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 C9orf57Q5W0N0 161 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 EPGNQ6UW88 154 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 ACAD11Q709F0 780 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 DPP9Q86TI2 863 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 LRRC52Q8N7C0 313 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 AGR3Q8TD06 166 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 ZNF669Q96BR6 464 aaPredicted RBP17.67■□□□□ 0.42
USB1-201ENST00000219281 AGAP2Q99490 1192 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 RBBP8Q99708 897 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 CAB39LQ9H9S4 337 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 RCOR3Q9P2K3 495 aaPredicted RBP17.67■□□□□ 0.42
USB1-201ENST00000219281 GJD2Q9UKL4 321 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 DERAQ9Y315 318 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 CDY2AQ9Y6F7 541 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 CDY1Q9Y6F8 540 aa17.67■□□□□ 0.42
USB1-201ENST00000219281 MYO18AQ92614 2054 aaKnown RBP17.66■□□□□ 0.42
USB1-201ENST00000219281 RAG1P15918 1043 aa17.66■□□□□ 0.42
USB1-201ENST00000219281 IRF9Q00978 393 aa17.66■□□□□ 0.42
USB1-201ENST00000219281 RBBP5Q15291 538 aaKnown RBP17.66■□□□□ 0.42
USB1-201ENST00000219281 DCAF4L1Q3SXM0 396 aa17.66■□□□□ 0.42
USB1-201ENST00000219281 FSCBQ5H9T9 825 aa17.66■□□□□ 0.42
USB1-201ENST00000219281 RASIP1Q5U651 963 aa17.66■□□□□ 0.42
USB1-201ENST00000219281 AP1ARQ63HQ0 302 aa17.66■□□□□ 0.42
USB1-201ENST00000219281 VCX3BQ9H321 246 aa17.66■□□□□ 0.42
USB1-201ENST00000219281 ARHGAP26Q9UNA1 814 aa17.66■□□□□ 0.42
USB1-201ENST00000219281 PLXNB2O15031 1838 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 CITO14578 2027 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 G3V2L1 256 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 UQCRBP14927 111 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 HOXA11P31270 313 aaPredicted RBP17.65■□□□□ 0.42
USB1-201ENST00000219281 SPRP35270 261 aaPredicted RBP17.65■□□□□ 0.42
USB1-201ENST00000219281 MAGEA12P43365 314 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 SERPINB8P50452 374 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 CDK7P50613 346 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 KLF10Q13118 480 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 MED21Q13503 144 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 TRIP10Q15642 601 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 DLG2Q15700 870 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 FSTL4Q6MZW2 842 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 CRYBG2Q8N1P7 616 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 NPLOC4Q8TAT6 608 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 MAPK15Q8TD08 544 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 SNX25Q9H3E2 840 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 KLHL8Q9P2G9 620 aaPredicted RBP17.65■□□□□ 0.42
USB1-201ENST00000219281 IGSF9Q9P2J2 1179 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 MAGED2Q9UNF1 606 aaPredicted RBP17.65■□□□□ 0.42
USB1-201ENST00000219281 CENPFP49454 3210 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 ZSWIM8A7E2V4 1837 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 ADIGQ0VDE8 80 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 DUSP28Q4G0W2 176 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 OTUD1Q5VV17 481 aaPredicted RBP17.65■□□□□ 0.42
USB1-201ENST00000219281 SPRYD7Q5W111 196 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.65■□□□□ 0.42
USB1-201ENST00000219281 HSFY1Q96LI6 401 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 LRRC40Q9H9A6 602 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 ADAM28Q9UKQ2 775 aa17.65■□□□□ 0.42
USB1-201ENST00000219281 A0A096LPK6 155 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 SPTLC1O15269 473 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 CD1EP15812 388 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 TKTP29401 623 aaKnown RBP17.64■□□□□ 0.41
USB1-201ENST00000219281 PRDX6P30041 224 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 GSTT1P30711 240 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 RAB27AP51159 221 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 LIMK2P53671 638 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 NME3Q13232 169 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 CNPY1Q3B7I2 92 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 PIGZQ86VD9 579 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 TDRD5Q8NAT2 981 aaKnown RBP17.64■□□□□ 0.41
USB1-201ENST00000219281 ISL2Q96A47 359 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 MOCOSQ96EN8 888 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 OR52B2Q96RD2 323 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 GORASP1Q9BQQ3 440 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 TINF2Q9BSI4 451 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 PACSIN3Q9UKS6 424 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 COL1A2P08123 1366 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms