RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CUL3Q13618 768 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 ZNF792Q3KQV3 632 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 MAP3K21Q5TCX8 1036 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 CES3Q6UWW8 571 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 RNF111Q6ZNA4 994 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 TNS4Q8IZW8 715 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 ZNF781Q8N8C0 355 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 OR52K1Q8NGK4 314 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 ZNF669Q96BR6 464 aaPredicted RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 SLC2A13Q96QE2 648 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 SLC9A7Q96T83 725 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 DUSP16Q9BY84 665 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 EBF3Q9H4W6 596 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 CYP4F11Q9HBI6 524 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 CASS4Q9NQ75 786 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 ZNF358Q9NW07 568 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 KLHL8Q9P2G9 620 aaPredicted RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 MID2Q9UJV3 735 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 A0A096LPK6 155 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 ZCWPW2A0A1B0GU75 182 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 MAGEB16A2A368 324 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 M0QYT0 321 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 SPTLC1O15269 473 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 XPOTO43592 962 aaKnown RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 TRIM13O60858 407 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 RNASEH1O60930 286 aaKnown RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 APOA4P06727 396 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 HOXD8P13378 290 aaPredicted RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 UQCRBP14927 111 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 PTPN3P26045 913 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 TKTP29401 623 aaKnown RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 HADHAP40939 763 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 HK2P52789 917 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 CSE1LP55060 971 aaKnown RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 KLF10Q13118 480 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 KBTBD6Q86V97 674 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 PLD6Q8N2A8 252 aaKnown RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 KCTD13Q8WZ19 329 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 WNT8BQ93098 351 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 CCDC124Q96CT7 223 aaKnown RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 GORASP1Q9BQQ3 440 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 BRD8Q9H0E9 1235 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 NXF3Q9H4D5 531 aaKnown RBP13.6□□□□□ -0.23
SRP54-201ENST00000216774 SETD4Q9NVD3 440 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 GJD2Q9UKL4 321 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 ADAMTS6Q9UKP5 1117 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 SSX2IPQ9Y2D8 614 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 HES2Q9Y543 173 aa13.6□□□□□ -0.23
SRP54-201ENST00000216774 UNCXA6NJT0 531 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 MTSS1O43312 755 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 ZBTB14O43829 449 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 CYP2C9P11712 490 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 GLDCP23378 1020 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 TAF6P49848 677 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 USP4Q13107 963 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 MED21Q13503 144 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 RBBP5Q15291 538 aaKnown RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 SV2CQ496J9 727 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 ANKRD20A4Q4UJ75 823 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 ST13P4Q8IZP2 240 aaPredicted RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 SLC7A14Q8TBB6 771 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 RDH11Q8TC12 318 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 URGCPQ8TCY9 931 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 GDPD5Q8WTR4 605 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 STON2Q8WXE9 905 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 NTAN1Q96AB6 310 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 CNDP1Q96KN2 507 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 DDX50Q9BQ39 737 aaKnown RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 CENPKQ9BS16 269 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 MCMBPQ9BTE3 642 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 NMRAL1Q9HBL8 299 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 TMPRSS4Q9NRS4 437 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 PRPF19Q9UMS4 504 aaKnown RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 LOC100653049A0A140TA62 436 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 SMIM28A0A1B0GU29 152 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 KCNK1O00180 336 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 SLC22A2O15244 555 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 HUS1O60921 280 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 GPR32O75388 356 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 KRT34O76011 436 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 KCNE1P15382 129 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 NPR3P17342 541 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 SERPINB6P35237 376 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 HCAR3P49019 387 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 PRKAA2P54646 552 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 PITX1P78337 314 aaPredicted RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 PPIDQ08752 370 aaKnown RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 SCAPQ12770 1279 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 SLC9B1Q4ZJI4 515 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 ZNF618Q5T7W0 954 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 KCTD11Q693B1 232 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 NAPRTQ6XQN6 538 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 SDCCAG8Q86SQ7 713 aaPredicted RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 HPS6Q86YV9 775 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 TDRD5Q8NAT2 981 aaKnown RBP13.59□□□□□ -0.23
SRP54-201ENST00000216774 NETO2Q8NC67 525 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 AZIN2Q96A70 460 aa13.59□□□□□ -0.23
SRP54-201ENST00000216774 BTBD9Q96Q07 612 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms