RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 USP12O75317 370 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 TBX10O75333 385 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 NCAM1P13591 858 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 MX2P20592 715 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 LIMK2P53671 638 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 SMAD1Q15797 465 aaKnown RBP22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ARL13BQ3SXY8 428 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ATG14Q6ZNE5 492 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 PAXIP1Q6ZW49 1069 aaPredicted RBP22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 NET1Q7Z628 596 aaPredicted RBP22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 GSTCDQ8NEC7 633 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 OR6Y1Q8NGX8 325 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 PPP4R1Q8TF05 950 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 GBA3Q9H227 469 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 TMEM30AQ9NV96 361 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 NMRK1Q9NWW6 199 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CACNG4Q9UBN1 327 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 TRHDEQ9UKU6 1024 aa22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 APOBEC2Q9Y235 224 aaKnown RBP22.56■■□□□ 1.2
NIPSNAP1-201ENST00000216121 IQCA1LA6NCM1 817 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 LTFP02788 710 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 USP17L7P0C7H9 530 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 GNAT1P11488 350 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ALOX15P16050 662 aaPredicted RBP22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CDC25CP30307 473 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CD68P34810 354 aaPredicted RBP22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 HARS2P49590 506 aaKnown RBP22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 SERPINB8P50452 374 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CDK7P50613 346 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 SESN3P58005 492 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 BEX3Q00994 111 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ANKRD20A4Q4UJ75 823 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 SPRYD7Q5W111 196 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 TRIM68Q6AZZ1 485 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 NRG4Q8WWG1 115 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 PGLYRP2Q96PD5 576 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 KATNAL1Q9BW62 490 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 COLEC11Q9BWP8 271 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 DDIT4Q9NX09 232 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 DNAJC28Q9NX36 388 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 KLHL2O95198 593 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 F9P00740 461 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 RALBP11234 206 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ZNF135P52742 658 aaPredicted RBP22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 GALNT2Q10471 571 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 MUM1Q2TAK8 710 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 STRA8Q7Z7C7 330 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CMC1Q7Z7K0 106 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 DNAAF3Q8N9W5 541 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CLEC11AQ9Y240 323 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 PTCH2Q9Y6C5 1203 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 NUP205Q92621 2012 aa22.55■■□□□ 1.2
NIPSNAP1-201ENST00000216121 MEIS3P2A8K0S8 358 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 HHLA1C9JL84 531 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CPA3P15088 417 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ARRB2P32121 409 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CACNA2D1P54289 1103 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ABCE1P61221 599 aaKnown RBP22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 TRMT5Q32P41 509 aaKnown RBP22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 FSTL4Q6MZW2 842 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 MAVSQ7Z434 540 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ULK2Q8IYT8 1036 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 MLPHQ9BV36 600 aaPredicted RBP22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 AP5M1Q9H0R1 490 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 PNPOQ9NVS9 261 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 MAGEB16A2A368 324 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 SMNDC1O75940 238 aaKnown RBP eCLIP22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 MYL4P12829 197 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 NPY2RP49146 381 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ITPRIPL1Q6GPH6 555 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 LRRC74BQ6ZQY2 392 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 BHLHA9Q7RTU4 235 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 VAT1Q99536 393 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 FAM167BQ9BTA0 163 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 THTPAQ9BU02 230 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ZNF358Q9NW07 568 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ZNF212Q9UDV6 495 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CDH9Q9ULB4 789 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 Q9Y3F1 56 aa22.54■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ZNF195O14628 629 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CPOXP36551 454 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CXCR3P49682 368 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 IDH3AP50213 366 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 FKBP1BP68106 108 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ZBTB17Q13105 803 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ANO7Q6IWH7 933 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 LMNTD2Q8IXW0 634 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 AGAP2Q99490 1192 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 SYT17Q9BSW7 474 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 SOX13Q9UN79 622 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 TIMM13Q9Y5L4 95 aaPredicted RBP22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 CIB2O75838 187 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 MPOP05164 745 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 C6orf222P0C671 652 aaPredicted RBP22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 GMPRP36959 345 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 ITGA9Q13797 1035 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 PLD6Q8N2A8 252 aaKnown RBP22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 DTX3LQ8TDB6 740 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 EPAS1Q99814 870 aa22.53■■□□□ 1.2
NIPSNAP1-201ENST00000216121 WDCPQ9H6R7 721 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms