RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PGAM1P18669 254 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 ATF6P18850 670 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 GJA8P48165 433 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 IFNAR2P48551 515 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 PPARDQ03181 441 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 FRG1Q14331 258 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 C14orf80Q86SX3 495 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 UMODL1-AS1Q8N2C9 162 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 ATPAF2Q8N5M1 289 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 GPR152Q8TDT2 470 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 ARNTL2Q8WYA1 636 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 TTC17Q96AE7 1141 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 CELF6Q96J87 481 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 PPP1R2P1Q96PQ5 205 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 CEP41Q9BYV8 373 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 CASS4Q9NQ75 786 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 ATP11BQ9Y2G3 1177 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 MAD1L1Q9Y6D9 718 aa14.66□□□□□ -0.06
RTFDC1-201ENST00000023939 GREB1Q4ZG55 1949 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 A0A1W2PPM1 405 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 MATN3O15232 486 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 ADAM12O43184 909 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 MAFKO60675 156 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 ABLIM3O94929 683 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 UPP2O95045 317 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 ASMTLO95671 621 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 SOD2P04179 222 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 DNAJB2P25686 324 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 NDST2P52849 883 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 WDR4P57081 412 aaKnown RBP14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 EFEMP1Q12805 493 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 NAB1Q13506 487 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 MS4A13Q5J8X5 152 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 LGSNQ5TDP6 509 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 TPGS2Q68CL5 300 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 TIGD7Q6NT04 549 aaPredicted RBP14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 CPLX4Q7Z7G2 160 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 SLC39A11Q8N1S5 342 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 CNTD1Q8N815 330 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 ANKRD42Q8N9B4 389 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 PDZD8Q8NEN9 1154 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 DEPDC1BQ8WUY9 529 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 DYDC1Q8WWB3 177 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 MAGEB18Q96M61 343 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 MLPHQ9BV36 600 aaPredicted RBP14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 HERC2P3Q9BVR0 1158 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 SLC39A8Q9C0K1 460 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 PRDM4Q9UKN5 801 aa14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 HBS1LQ9Y450 684 aaKnown RBP14.65□□□□□ -0.06
RTFDC1-201ENST00000023939 ARHGAP42A6NI28 874 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 DRGXA6NNA5 263 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 ZWINTO95229 277 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 MOCS2O96007 188 aaPredicted RBP14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 JCHAINP01591 159 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 CCNB1P14635 433 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 KRT4P19013 534 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 OR1D2P34982 312 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 IL9RQ01113 521 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 DSG1Q02413 1049 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 SLC18A2Q05940 514 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 PRPSAP1Q14558 356 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 C10orf120Q5SQS8 335 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 GKAP1Q5VSY0 366 aaPredicted RBP14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 TTC39BQ5VTQ0 682 aaPredicted RBP14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 KLHDC10Q6PID8 442 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 FBXO46Q6PJ61 603 aaPredicted RBP14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 RGS9BPQ6ZS82 235 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 SH2D5Q6ZV89 423 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 MICALCLQ6ZW33 695 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 PIGWQ7Z7B1 504 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 CMTR2Q8IYT2 770 aaKnown RBP14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 BANPQ8N9N5 519 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 MTBPQ96DY7 904 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 MRRFQ96E11 262 aaKnown RBP14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 ZNF558Q96NG5 402 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 FCRL5Q96RD9 977 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 CLSTN3Q9BQT9 956 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 ZYG11BQ9C0D3 744 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 NSRP1Q9H0G5 558 aaKnown RBP14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 LRRC40Q9H9A6 602 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 KIF9Q9HAQ2 790 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 SMYD2Q9NRG4 433 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 TMEM248Q9NWD8 314 aa14.64□□□□□ -0.07
RTFDC1-201ENST00000023939 CXorf49A8MYA2 514 aaPredicted RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 DFFAO00273 331 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 KIAA0355O15063 1070 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 TM9SF1O15321 606 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 KRT37O76014 449 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 TIMP1P01033 207 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 MT-ND3P03897 115 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 SNRPAP09012 282 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 NFKB1P19838 968 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 MGAT1P26572 445 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 GBP2P32456 591 aaPredicted RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 NPY2RP49146 381 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 SERPINB9P50453 376 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 SPARCL1Q14515 664 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 LRRC14Q15048 493 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 QPCTQ16769 361 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 KIAA1841Q6NSI8 718 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms