RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tm9sf1Q9DBU0 606 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Neu2Q9JMH3 379 aa16.27■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gm5483B2RV77 97 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ism2D3Z6A3 493 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 4930558K02RikE0CXC6 182 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 SmgcF6VRN1 385 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Hes2O54792 157 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Olfm1O88998 485 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Zfy1P10925 782 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Htr2cP34968 459 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 InhbaQ04998 424 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Sdr16c6Q05A13 316 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Esyt3Q5DTI8 891 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Npdc1Q64322 332 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Spata24Q6P926 205 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Usp43Q8BUM9 1132 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Rpa1Q8VEE4 623 aaKnown RBP16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Smim14Q91VT8 99 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 PalmdQ9JHU2 551 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Cep350E9Q309 3095 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Akain1G3UWD5 69 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Rasgrf2P70392 1189 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Brms1lQ3U1T3 323 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Trim80Q3V061 624 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Parp6Q6P6P7 630 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Npas4Q8BGD7 802 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Nup54Q8BTS4 510 aaKnown RBP16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ttc24Q8BYG0 334 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 PygbQ8CI94 843 aaKnown RBP16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 SncbQ91ZZ3 133 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gps2Q921N8 327 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Nme3Q9WV85 169 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Lilra5D3Z7A9 295 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Serpine3E9Q6A2 401 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Dnase1l3O55070 310 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gpr25P0C5I1 358 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 MipP51180 263 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Fut7Q11131 389 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Phactr4Q501J7 694 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Fnip1Q68FD7 1165 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Sh3rf1Q69ZI1 892 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Abcg2Q7TMS5 657 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 SrlQ7TQ48 910 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 ItpkcQ7TS72 678 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Nlrp4bQ8C6J9 863 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Bbox1Q924Y0 387 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Setd6Q9CWY3 473 aa16.26■□□□□ 0.19
Trim39-203ENSMUST00000113706 Grem1O70326 184 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Adcy6Q01341 1165 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Syce2Q505B8 171 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Olfr1505Q7TQQ2 316 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 SarafQ8R3Q0 334 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Olfr348Q8VGK3 313 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Barhl2Q8VIB5 384 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Reep3Q99KK1 254 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Noxred1Q9D3S5 366 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Oser1Q9D722 291 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Syde1Q9DBZ9 737 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Stap1Q9JM90 297 aaKnown RBP16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Obsl1D3YYU8 1804 aaKnown RBP16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Usp51B1AY15 661 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gm11239E9Q5Z9 360 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gm11237F2Z3W5 360 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gm11238F2Z478 360 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Oas1aP11928 367 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gm428Q3UTE2 360 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Zfp759Q7M6X3 721 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ccdc50Q810U5 305 aaKnown RBP16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Rab44Q8CB87 725 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Oas1gQ8K469 367 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Caap1Q8VDY9 356 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Olfr615Q8VGY4 313 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Rpl34Q9D1R9 117 aaKnown RBP16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Mrps9Q9D7N3 390 aaKnown RBP16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Zdbf2Q5SS00 2493 aaKnown RBP16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Kiaa0100Q5SYL3 2234 aa16.25■□□□□ 0.19
Trim39-203ENSMUST00000113706 Vmn2r27D3YUK6 857 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Vmn2r88L7N1W8 857 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Wnt3aP27467 352 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 SykP48025 629 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gbp1Q01514 589 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 GaltQ03249 379 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gpr142Q7TQN9 365 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Fzd10Q8BKG4 582 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Tmem82Q8R115 356 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Agap3Q8VHH5 910 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Pcdhb19Q91Y01 801 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Atpaf2Q91YY4 289 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Lcn6A2AJB9 181 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Prf1P10820 554 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Dpf3P58269 378 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Tubgcp3P58854 905 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Tespa1Q3U132 458 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 KrtdapQ3V2T4 102 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Afg1lQ3V384 480 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 RilpQ5ND29 369 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Hif1aQ61221 836 aaKnown RBP16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Spa17Q62252 149 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Crtc1Q68ED7 630 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ddhd1Q80YA3 547 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms