RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Pitpnm2Q6ZPQ6 1335 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Hsd17b7O88736 334 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 PhgdhQ61753 533 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 SyncripQ7TMK9 623 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 C2cd2lQ80X80 706 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Zbtb44Q8R0A2 453 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Olfr1302Q8VGE9 315 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 CatsperzQ9CQP8 194 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Prdm5Q9CXE0 599 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Gtf3c6Q9D8P7 227 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Capn6O35646 641 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Cdh6P97326 790 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Serpina6Q06770 397 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Ubtfl1Q3USZ2 394 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 2900092C05RikQ5I0V9 184 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Slc26a2Q62273 739 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 PapolgQ6PCL9 739 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Olfr532Q8VGT4 309 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Ndufs1Q91VD9 727 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Scnn1bQ9WU38 638 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 4931408C20RikE9PWP9 1381 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Catsperg2C6KI89 1145 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Rpl21O09167 160 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Nfkb1P25799 971 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 PamP97467 979 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Syce2Q505B8 171 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Rfx4Q7TNK1 735 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Angel2Q8K1C0 544 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Wdr11Q8K1X1 1223 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 HnrnplQ8R081 586 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Dapk2Q8VDF3 370 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Mcrs1Q99L90 462 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Ak1Q9R0Y5 194 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Pknox1O70477 436 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Aldh2P47738 519 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Aldh3a1P47739 453 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Defa8P50706 81 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Adra1dP97714 562 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Antxr2Q6DFX2 487 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Nipal1Q8BMW7 416 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Prkaa2Q8BRK8 552 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Rdh13Q8CEE7 334 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Trap1Q9CQN1 706 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Rnft1Q9DCN7 395 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Trip11E9Q512 1976 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Pold2O35654 469 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 TraddQ3U0V2 310 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Sfmbt2Q5DTW2 938 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Scube3Q66PY1 993 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 KdsrQ6GV12 332 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 RybpQ8CCI5 228 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Taldo1Q93092 337 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Hes6Q9JHE6 224 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Wdr12Q9JJA4 423 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Sptbn2Q68FG2 2388 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Grik3B1AS29 919 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Foxn2E9Q7L6 429 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Itgb5O70309 798 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 AprtP08030 180 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 InaP46660 501 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Cdh8P97291 799 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Znf112Q0VAW7 879 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Proser1Q5PRE5 913 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Nr0b1Q61066 472 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Samd4bQ80XS6 687 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Zbtb46Q8BID6 600 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Ints6lQ8BND4 861 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Igdcc3Q8BQC3 813 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Klhl36Q8R124 613 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Olfr30Q8VGD8 315 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Fam227aQ9D3V8 625 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Bscl2Q9Z2E9 383 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Znf541Q0GGX2 1363 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 YwhaqP68254 245 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 C1orf109Q499E6 217 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Klra3Q64329 266 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Hmgb4Q6P8W9 181 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Bhlhe22Q8C6A8 355 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Parp9Q8CAS9 866 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Csde1Q91W50 798 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Asb7Q91ZU0 318 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Nudt14Q9D142 222 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Fam187aQ9D3R5 417 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Clvs1Q9D4C9 354 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Emilin3P59900 758 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Colec11Q3SXB8 272 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Atp11bQ6DFW5 1175 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Awat2Q6E1M8 333 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Gprc5aQ8BHL4 356 aa6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Mrto4Q9D0I8 239 aaKnown RBP6.85□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Magea4F2Z493 315 aa6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Csnk2bP67871 215 aaKnown RBP6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Znf513Q6PD29 541 aa6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Fnip2Q80TD3 1108 aa6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Tubgcp5Q8BKN5 1024 aa6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Gper1Q8BMP4 375 aa6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 NkrfQ8BY02 690 aaKnown RBP6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 N4bp2l2Q8JZS6 575 aa6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 IntS13Q8QZV7 732 aa6.84□□□□□ -1.31
Scn8a-205ENSMUST00000108910 Ttc39cQ8VE09 580 aa6.84□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms