RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gm5538W4VSP6 401 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Taf1Q80UV9 1891 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 NynrinQ5DTZ0 1840 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm5483B2RV77 97 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Adamts6D3Z1A5 1117 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ercc2O08811 760 aaKnown RBP9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Wnt3aP27467 352 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ptpn1P35821 432 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Sult1e1P49891 295 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tespa1Q3U132 458 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ndst1Q3UHN9 882 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm5431Q5NCB3 844 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 XiapQ60989 496 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Dusp16Q6PCP3 660 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fam120bQ6RI63 786 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Plin5Q8BVZ1 463 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tbc1d22aQ8R5A6 516 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zcchc18Q8VD24 393 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 P2yr13Q9D8I2 337 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ccdc97Q9DBT3 340 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 CrotQ9DC50 612 aa9.93□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm36028A0A0U1RPM1 299 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pold2O35654 469 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Chrna1P04756 457 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Sh3bp2Q06649 559 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Adgre1Q61549 931 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm7247Q6UY52 187 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Arhgap26Q6ZQ82 814 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Q80Y73 168 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc41a1Q8BJA2 512 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Daam1Q8BPM0 1077 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fam160b1Q8CDM8 764 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Hdac11Q91WA3 347 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Atpaf2Q91YY4 289 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Acot13Q9CQR4 140 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ccdc86Q9JJ89 426 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Nrxn2E9Q7X7 1710 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Map7d3A2AEY4 876 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Vmn2r103E9PWW0 856 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm10722F6VLK5 217 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 AvilO88398 819 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 IppP28575 584 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gsta3P30115 221 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Oas1fQ14AZ4 364 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 OsbpQ3B7Z2 805 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lsg1Q3UM18 644 aaKnown RBP9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gemin4Q6P6L6 1058 aaKnown RBP9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ahcyl1Q80SW1 530 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ppm1lQ8BHN0 360 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Qsox1Q8BND5 748 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Sh2d5Q8JZW5 429 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Snapc1Q8K0S9 389 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rbmx2Q8R0F5 326 aaKnown RBP9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tbc1d13Q8R3D1 400 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fbxw7Q8VBV4 629 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Prmt7Q922X9 692 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Txndc9Q9CQ79 226 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Dcp2Q9CYC6 422 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 MtrexQ9CZU3 1040 aaKnown RBP9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 S100pbpQ9D5K4 396 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Borcs5Q9D920 195 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc2a5Q9WV38 501 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gria4Q9Z2W8 902 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Col4a5Q63ZW6 1691 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ttc6G3UYY4 1857 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fam155bA2BDP1 471 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Abhd12bG3UZN6 359 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Top6blJ3QMY9 579 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Sypl2O89104 264 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pex2P55098 305 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Dsc2P55292 902 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Mc4rP56450 332 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Fastkd1Q6DI86 829 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Senp5Q6NXL6 749 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tmem130Q6NXM3 419 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Scube1Q6NZL8 1018 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zdhhc19Q810M5 347 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Smndc1Q8BGT7 238 aaKnown RBP9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Sgsm3Q8VCZ6 750 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Actr3Q99JY9 418 aaKnown RBP9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trim8Q99PJ2 551 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ska2Q9CR46 120 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Katnal2Q9D3R6 539 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 NfkbizQ9EST8 728 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc12a4Q9JIS8 1085 aa9.92□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Frmpd3A0A140LIW3 1774 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ccdc120A2AEV7 629 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zfp715G3X9T1 886 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 CrymO54983 313 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cyp2f2P33267 491 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trim67Q505D9 768 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Avpr1aQ62463 423 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Lrrc27Q80YS5 523 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 FsbpQ8BKE5 299 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc47a1Q8K0H1 567 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ppp6r2Q8R3Q2 923 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Otud7aQ8R554 926 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 GldcQ91W43 1025 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ier5lQ99J55 406 aa9.91□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Tma16Q9CR02 221 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms