RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Ppp1r14aQ91VC7 147 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Irx4Q9QY61 515 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 DexiQ9WUQ7 95 aa9.13□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyp2b23E9Q593 491 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3072F6SKY8 209 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Vmn2r19G5E8G4 854 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 RargP18911 458 aaKnown RBP9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nckap1P28660 1128 aaKnown RBP9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Spata16Q8C636 571 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 RtknQ8C6B2 564 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Stbd1Q8C7E7 338 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 GhitmQ91VC9 346 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gorasp1Q91X51 446 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcdhgc3Q91XX1 934 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcdhb8Q91XZ2 779 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 3110001I22RikQ9CZ70 312 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rab32Q9CZE3 223 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Bcas2Q9D287 225 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Senp8Q9D2Z4 221 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Eef1akmt2Q9D853 244 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Kcnj10Q9JM63 379 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dpy19l4A2AJQ3 722 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fam71dD3YV92 440 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc35g2D3YVE8 412 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Sept4P28661 478 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CamlgP49070 294 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 NpeppsQ11011 920 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Arcn1Q5XJY5 511 aaKnown RBP9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Klra5Q60652 266 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dlgap3Q6PFD5 977 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Inca1Q6PKN7 231 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc36a4Q8CH36 500 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ttc4Q8R3H9 386 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Glrx3Q9CQM9 337 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Lrrc17Q9CXD9 443 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Chd1lQ9CXF7 900 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dclk1Q9JLM8 756 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Magi2Q9WVQ1 1275 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Znf804aA2AKY4 1200 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 JrklB2RRL2 523 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Inpp5aE9QAS7 422 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gosr2O35166 212 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc32a1O35633 525 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Myl4P09541 193 aaKnown RBP9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gabrr2P56476 465 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Traf3ip1Q149C2 625 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pdp2Q504M2 532 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rbbp8Q80YR6 893 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tmem220Q8BP07 167 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tcp11l1Q8BTG3 509 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Bbs4Q8C1Z7 520 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cables2Q8K3M5 476 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 HaghQ99KB8 309 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Abtb1Q99LJ2 478 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Znhit3Q9CQK1 151 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ephx1Q9D379 455 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Xlr4bQ9JJQ7 215 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Sh3glb1Q9JK48 365 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tex13cD3YU32 604 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Adgrf2E9Q4J9 644 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hnrnpa2b1O88569 353 aaKnown RBP9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ets1P27577 440 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 RykQ01887 594 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CamkvQ3UHL1 512 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 EsrrbQ61539 433 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 MtbpQ8BJS8 894 aaKnown RBP9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Golph3lQ8R088 285 aaKnown RBP9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Det1Q9D0A0 550 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gins2Q9D600 185 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 NgbQ9ER97 151 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ccr10Q9JL21 362 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Abcc9P70170 1546 aa9.12□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Scgb2b18A0A087WPA9 112 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Trappc11B2RXC1 1133 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 SelenonD3Z2R5 557 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfp558E9Q1J0 407 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc4a5E9Q3M5 1116 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ccdc7bE9Q9Y3 381 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm17026K7N6Z0 213 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyp2d34L7N463 504 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc24a2Q14BI1 711 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fbxw20Q5U467 468 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ppp2r2aQ6P1F6 447 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 ToporsQ80Z37 1033 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc25a24Q8BMD8 475 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tmem45bQ8VCZ2 278 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcdhb6Q91XZ4 772 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cep97Q9CZ62 856 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Armc10Q9D0L7 306 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm10406A6NAS4 205 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3373A6NAS7 205 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3298E9PW80 205 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm2237E9Q501 211 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mroh4G3X8W1 983 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Kbtbd7G5E8C2 690 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Scgb1b3J3QJY4 93 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm10338K7N692 204 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3591K7N6X2 186 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3667K7N757 205 aa9.11□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3239L7N2D9 227 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms