RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Kcnc2Q14B80 642 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 TceancQ3US16 359 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Sult1d1Q3UZZ6 295 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Q3V0E1 1183 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 JrkQ60976 557 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Cand2Q6ZQ73 1235 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Zfp759Q7M6X3 721 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Afap1l1Q8BZI0 768 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Snx30Q8CE50 437 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Q8R1Y2 203 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Arl2Q9D0J4 184 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ddit4Q9D3F7 229 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Tsga13Q9DA17 273 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Scamp5Q9JKD3 235 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Msl3Q9WVG9 525 aa20.64■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Col5a3Q9JLI2 1739 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Vmn2r104E9Q2J5 860 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ttc7bE9Q6P5 843 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Vmn2r19G5E8G4 854 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Fbxo39Q5NBU5 443 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 ChpfQ6IQX7 774 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Tatdn1Q6P8M1 295 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Trpm4Q7TN37 1213 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Best2Q8BGM5 508 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Heatr3Q8BQM4 679 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Stx16Q8BVI5 326 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Pde10aQ8CA95 790 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 AclyQ91V92 1091 aaKnown RBP20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 GatbQ99JT1 557 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Oxct2bQ9ESL0 520 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Oxct2aQ9JJN4 520 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Wdr46Q9Z0H1 622 aaKnown RBP20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Gm8113E0CXS8 587 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Cd151O35566 253 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Dync1i2O88487 612 aaKnown RBP20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 MipP51180 263 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Metap1Q8BP48 386 aaKnown RBP20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Dcun1d2Q8BZJ7 259 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Rab44Q8CB87 725 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Amer2Q8CCJ4 672 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ophn1Q99J31 802 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Taf11Q99JX1 211 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Neu2Q9JMH3 379 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Map2k5Q9WVS7 448 aa20.63■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Pate3B3GLJ3 98 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 SmgcF6VRN1 385 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Bmpr2O35607 1038 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Dsg3O35902 993 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Gsta4P24472 222 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Apobec1P51908 229 aaKnown RBP20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 UrgcpQ5NCI0 926 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Mef2dQ63943 514 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ssxb5Q6XAS2 159 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Xylt1Q811B1 953 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Thnsl1Q8BH55 747 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Slc7a4Q8BLQ7 635 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Tmem82Q8R115 356 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Terb2Q9D494 218 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Vmn2r25W4VSP2 855 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ccdc13D3YV10 709 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Tekt5G5E8A8 557 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 BhmtO35490 407 aaKnown RBP20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Glud1P26443 558 aaKnown RBP20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Cyp2c38P56655 490 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 S100a5P63084 93 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 MregQ6NVG5 214 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Il17reQ8BH06 637 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 CenpuQ8C4M7 410 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ppa2Q91VM9 330 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Zfp617Q91WM0 559 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Sh3d19Q91X43 789 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Mrps22Q9CXW2 359 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Nt5c3aQ9D020 331 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Cyp4v2Q9DBW0 525 aa20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Igf2rQ07113 2483 aaKnown RBP20.62■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Morc3F7BJB9 942 aaKnown RBP20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Gp1bbP56400 206 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 B3gntl1Q3U129 357 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Pla2g4dQ50L43 825 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Hif1aQ61221 836 aaKnown RBP20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Zfp512bQ6PHP4 879 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Robo4Q8C310 1012 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Prr33Q8C494 260 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Angel1Q8VCU0 667 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Alg9Q8VDI9 611 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Rabep2Q91WG2 554 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Prkag2Q91WG5 566 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Tm9sf1Q9DBU0 606 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Nme3Q9WV85 169 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ms4a4aA0A087WRT7 236 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Fam167bP17257 162 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Acot8P58137 320 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Mif4gdQ3UBZ5 222 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ppp1r13lQ5I1X5 824 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Usp17laQ61068 526 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Dnajb13Q80Y75 316 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Ccdc68Q8BVC4 333 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Znf276Q8CE64 614 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Dlgap1Q9D415 992 aa20.61■□□□□ 0.89
Ctdsp1-201ENSMUST00000027367 Stap1Q9JM90 297 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms