RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Drc3Q9D5E4 523 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Fip1l1Q9D824 581 aaKnown RBP16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Poc5Q9DBS8 558 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 C1qtnf1Q9QXP7 281 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Znf683I7HJS4 458 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Cd2P08920 344 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 SnnP61807 88 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ldb1P70662 411 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Polr1bP70700 1135 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tmprss15P97435 1069 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 AurkaP97477 395 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Klra8Q60682 266 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Rfx4Q7TNK1 735 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Elac2Q80Y81 831 aaKnown RBP16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 ChfrQ810L3 664 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Dars2Q8BIP0 653 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 CoprsQ9CQ13 173 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tagln3Q9R1Q8 199 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mtm1Q9Z2C5 603 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Bscl2Q9Z2E9 383 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Akap10O88845 662 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Irf3P70671 419 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Gm1587Q3UT80 123 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Cspg5Q71M36 566 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Plin5Q8BVZ1 463 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Nkiras1Q8CEC5 192 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ap3m2Q8R2R9 418 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Rnh1Q91VI7 456 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Efhc1Q9D9T8 648 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ern2Q9Z2E3 911 aa16.55■□□□□ 0.24
Trim28-201ENSMUST00000005705 A0A1Y7VP24 259 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Gm6133B2RY53 190 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Osbpl8B9EJ86 889 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Zc3h12bG3X9I7 835 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Sh3pxd2aO89032 1124 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 LtfP08071 707 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ephx2P34914 554 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Zdhhc19Q810M5 347 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Klhl2Q8JZP3 593 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Slco4a1Q8K078 723 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pcdh18Q8VHR0 1134 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Dpp7Q9ET22 506 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pi16Q9ET66 489 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Dcun1d1Q9QZ73 259 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 SktA2AQ25 1946 aaKnown RBP16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Celf5D3Z4T1 395 aaKnown RBP16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Olfr220E9Q050 325 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 XntrpcF8VQM8 1264 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ptpn1P35821 432 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Slc39a14Q75N73 489 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Olfr1415Q7TQS4 311 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Clec4b1Q7TS58 209 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ankrd45Q810N6 248 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ireb2Q811J3 963 aaKnown RBP16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ppme1Q8BVQ5 386 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Aph1bQ8C7N7 257 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ppp6r2Q8R3Q2 923 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Acsf2Q8VCW8 615 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Olfr1416Q8VGU4 312 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Nsmce2Q91VT1 247 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Arhgap8Q9CXP4 425 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Chit1Q9D7Q1 464 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 Stk32bQ9JJX8 414 aa16.54■□□□□ 0.24
Trim28-201ENSMUST00000005705 PiggD3Z3Y1 983 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Slc6a13P31649 602 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mtf2Q02395 593 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Nab1Q61122 486 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Znf148Q61624 794 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pnma8aQ80VM8 430 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pacs1Q8K212 961 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tas1r3Q925D8 858 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Katnal2Q9D3R6 539 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tsga13Q9DA17 273 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Serpinb9bQ9DAV6 377 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tubb3Q9ERD7 450 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Dnajc12Q9R022 198 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Rps6ka2Q9WUT3 733 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 VarsQ9Z1Q9 1263 aaKnown RBP16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 NuggcD3YWJ0 796 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mroh5E9PUJ8 762 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Plekha5E9Q6H8 1269 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Gm10719E9Q7T3 227 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 F6Y6L6 278 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mllt10O54826 1068 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mc4rP56450 332 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Il6stQ00560 917 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Serpina6Q06770 397 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Coq10bQ3THF9 240 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Q3U4G0 281 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tmem26Q3UP23 366 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Jade1Q6ZPI0 834 aaKnown RBP16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Klhl38Q8BSF5 581 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 HscbQ8K3A0 234 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pex6Q99LC9 981 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 MmadhcQ99LS1 296 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 1700080O16RikQ9D9G4 284 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Prg3Q9JL95 222 aa16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Akap8lQ9R0L7 642 aaKnown RBP16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 Nfx1B1AY10 1114 aaKnown RBP16.53■□□□□ 0.24
Trim28-201ENSMUST00000005705 FaahO08914 579 aa16.53■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms