RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 CrtamQ149L7 389 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rtkn2Q14B46 604 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fam131bQ3TY60 332 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ifi47Q61635 420 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ahcyl1Q80SW1 530 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2aaQ8CGP4 129 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 BroxQ8K2Q7 411 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Eps8l2Q99K30 729 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 St7Q99M96 577 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rnf128Q9D304 428 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rin2Q9D684 903 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AvenQ9D9K3 342 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gipc2Q9Z2H7 314 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Znf608Q56A10 1511 aa9.33□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Srsf11E9Q6E5 511 aaKnown RBP9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vmn2r67K7N6T2 851 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cyp2j6O54750 501 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hmx1O70218 332 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ets2P15037 468 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Sstr3P30935 428 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PnmtP40935 295 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pon1P52430 355 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cyp2c40P56657 491 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gjb4Q02738 266 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ptchd3Q0EEE2 906 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Grm2Q14BI2 872 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mapkap1Q8BKH7 522 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Usp27Q8CEG8 438 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PolbQ8K409 335 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Plekhg6Q8R0J1 787 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Guca1bQ8VBV8 201 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cdhr5Q8VHF2 831 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ddx20Q9JJY4 825 aaKnown RBP9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tob2Q9JM55 345 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Dnaja2Q9QYJ0 412 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PpigA2AR02 752 aaKnown RBP9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Acot1O55137 419 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 H2-EaP01904 255 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 P04224 255 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PdgfaP20033 211 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Wee1P47810 646 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 LtbrP50284 415 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Smad1P70340 465 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ncf4P97369 339 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rnf145Q5SWK7 663 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Shc3Q61120 474 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tas2r134Q7TQB0 298 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 McubQ810S1 345 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pcid2Q8BFV2 399 aaKnown RBP9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tmsb15lQ8C0W0 80 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ifnl3Q8CGK6 193 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mboat7Q8CHK3 473 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Lin7aQ8JZS0 233 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vwa1Q8R2Z5 415 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 MyocdQ8VIM5 935 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 UqcrbQ9D855 111 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ngly1Q9JI78 651 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tjp3Q9QXY1 905 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Slc26a3Q9WVC8 757 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Atp6v1c1Q9Z1G3 382 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mfsd4b4J3QNS5 503 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vmn2r39L7N2E5 861 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Unc5cO08747 931 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tpst1O70281 370 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 TecP24604 630 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Atp6v0d1P51863 351 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Irf6P97431 467 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Trim63Q38HM4 350 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cyp2c66Q5GLZ0 490 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Zscan26Q5RJ54 466 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr301Q7TS04 311 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Crls1Q80ZM8 303 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gper1Q8BMP4 375 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Aim2Q91VJ1 354 aaKnown RBP9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 GzmnQ920S1 248 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tex13bQ99MW5 186 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Inpp4aQ9EPW0 939 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olig1Q9JKN5 260 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Asap1Q9QWY8 1147 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Net1Q9Z206 595 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rnf19bA2A7Q9 732 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ugt1a8D3Z748 530 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ugt1a10E9PXN7 530 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prl2c3P04768 224 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 M6prP24668 278 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mtf2Q02395 593 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Khdc4Q3TCX3 612 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mup20Q5FW60 181 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fam20cQ5MJS3 579 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PoliQ6R3M4 717 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tmem59lQ7TNI2 337 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr1057Q7TR75 315 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ugt2a1Q80X89 528 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Entpd3Q8BFW6 529 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Depdc1aQ8CIG0 804 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mtg1Q8R2R6 326 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pcdhb10Q91VE5 797 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hdhd5Q91WM2 419 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pcdhgb2Q91XX7 928 aa9.32□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Slc13a2Q9ES88 586 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms