RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PIP4K2BP78356 416 aa23.8■■□□□ 1.4
PHGDH-230ENST00000641927 KRT28Q7Z3Y7 464 aa23.8■■□□□ 1.4
PHGDH-230ENST00000641927 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
PHGDH-230ENST00000641927 GGNBP2Q9H3C7 697 aa23.79■■□□□ 1.4
PHGDH-230ENST00000641927 NRKQ7Z2Y5 1582 aa23.79■■□□□ 1.4
PHGDH-230ENST00000641927 FYB1O15117 783 aa23.79■■□□□ 1.4
PHGDH-230ENST00000641927 NME9Q86XW9 330 aa23.79■■□□□ 1.4
PHGDH-230ENST00000641927 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
PHGDH-230ENST00000641927 NPC1L1Q9UHC9 1359 aa23.77■■□□□ 1.4
PHGDH-230ENST00000641927 MIER1Q8N108 512 aa23.77■■□□□ 1.4
PHGDH-230ENST00000641927 SSH2Q76I76 1423 aa23.77■■□□□ 1.4
PHGDH-230ENST00000641927 TTC21AQ8NDW8 1320 aa23.77■■□□□ 1.4
PHGDH-230ENST00000641927 NSD2O96028 1365 aa23.77■■□□□ 1.39
PHGDH-230ENST00000641927 ROBO1Q9Y6N7 1651 aa23.76■■□□□ 1.39
PHGDH-230ENST00000641927 KIF20BQ96Q89 1820 aa23.76■■□□□ 1.39
PHGDH-230ENST00000641927 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
PHGDH-230ENST00000641927 LMOD2Q6P5Q4 547 aa23.75■■□□□ 1.39
PHGDH-230ENST00000641927 MORC1Q86VD1 984 aa23.75■■□□□ 1.39
PHGDH-230ENST00000641927 RALBP1Q15311 655 aa23.74■■□□□ 1.39
PHGDH-230ENST00000641927 ABTB2Q8N961 1025 aa23.74■■□□□ 1.39
PHGDH-230ENST00000641927 ZRANB1Q9UGI0 708 aa23.74■■□□□ 1.39
PHGDH-230ENST00000641927 COG3Q96JB2 828 aa23.73■■□□□ 1.39
PHGDH-230ENST00000641927 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
PHGDH-230ENST00000641927 NUTM2GQ5VZR2 741 aa23.72■■□□□ 1.39
PHGDH-230ENST00000641927 PARD3Q8TEW0 1356 aa23.72■■□□□ 1.39
PHGDH-230ENST00000641927 PXDNQ92626 1479 aa23.71■■□□□ 1.39
PHGDH-230ENST00000641927 NLRP6P59044 892 aa23.7■■□□□ 1.39
PHGDH-230ENST00000641927 TRPM3Q9HCF6 1732 aaPredicted RBP23.7■■□□□ 1.38
PHGDH-230ENST00000641927 NHSL1Q5SYE7 1610 aa23.69■■□□□ 1.38
PHGDH-230ENST00000641927 PIK3C2AO00443 1686 aa23.69■■□□□ 1.38
PHGDH-230ENST00000641927 SBNO1A3KN83 1393 aa23.68■■□□□ 1.38
PHGDH-230ENST00000641927 PLEKHG5O94827 1062 aa23.68■■□□□ 1.38
PHGDH-230ENST00000641927 SOS2Q07890 1332 aaPredicted RBP23.68■■□□□ 1.38
PHGDH-230ENST00000641927 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
PHGDH-230ENST00000641927 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
PHGDH-230ENST00000641927 TNS3Q68CZ2 1445 aa23.65■■□□□ 1.38
PHGDH-230ENST00000641927 SOX12O15370 315 aa23.65■■□□□ 1.38
PHGDH-230ENST00000641927 NLRP13Q86W25 1043 aa23.65■■□□□ 1.38
PHGDH-230ENST00000641927 OVOS2A0A0J9YW53 1432 aa23.65■■□□□ 1.38
PHGDH-230ENST00000641927 OVOS2Q6IE36 1432 aa23.65■■□□□ 1.38
PHGDH-230ENST00000641927 USP31Q70CQ4 1352 aa23.65■■□□□ 1.38
PHGDH-230ENST00000641927 SPATA31A3Q5VYP0 1347 aa23.64■■□□□ 1.38
PHGDH-230ENST00000641927 AHDC1Q5TGY3 1603 aaPredicted RBP23.63■■□□□ 1.37
PHGDH-230ENST00000641927 PPP2R1AP30153 589 aa23.63■■□□□ 1.37
PHGDH-230ENST00000641927 ALS2Q96Q42 1657 aa23.62■■□□□ 1.37
PHGDH-230ENST00000641927 ARHGEF10O15013 1369 aa23.62■■□□□ 1.37
PHGDH-230ENST00000641927 PHLPP1O60346 1717 aa23.61■■□□□ 1.37
PHGDH-230ENST00000641927 FBLN1P23142 703 aa23.6■■□□□ 1.37
PHGDH-230ENST00000641927 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
PHGDH-230ENST00000641927 MARF1Q9Y4F3 1742 aaKnown RBP23.57■■□□□ 1.36
PHGDH-230ENST00000641927 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
PHGDH-230ENST00000641927 USP54Q70EL1 1684 aa23.56■■□□□ 1.36
PHGDH-230ENST00000641927 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
PHGDH-230ENST00000641927 MTHFSP49914 203 aa23.55■■□□□ 1.36
PHGDH-230ENST00000641927 RRS1Q15050 365 aaKnown RBP23.55■■□□□ 1.36
PHGDH-230ENST00000641927 CABLES1Q8TDN4 633 aa23.55■■□□□ 1.36
PHGDH-230ENST00000641927 MRS2Q9HD23 443 aa23.55■■□□□ 1.36
PHGDH-230ENST00000641927 KCNH5Q8NCM2 988 aa23.54■■□□□ 1.36
PHGDH-230ENST00000641927 USP19O94966 1318 aa23.54■■□□□ 1.36
PHGDH-230ENST00000641927 AATKQ6ZMQ8 1374 aa23.54■■□□□ 1.36
PHGDH-230ENST00000641927 COL16A1Q07092 1604 aaPredicted RBP23.54■■□□□ 1.36
PHGDH-230ENST00000641927 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
PHGDH-230ENST00000641927 GCP02774 474 aa23.53■■□□□ 1.36
PHGDH-230ENST00000641927 HAP1P54257 671 aaPredicted RBP23.53■■□□□ 1.36
PHGDH-230ENST00000641927 POLKQ9UBT6 870 aa23.52■■□□□ 1.36
PHGDH-230ENST00000641927 EMILIN1Q9Y6C2 1016 aa23.52■■□□□ 1.36
PHGDH-230ENST00000641927 MED1Q15648 1581 aaPredicted RBP23.52■■□□□ 1.36
PHGDH-230ENST00000641927 ZBTB7CA1YPR0 619 aa23.51■■□□□ 1.35
PHGDH-230ENST00000641927 MAP2P11137 1827 aaKnown RBP23.51■■□□□ 1.35
PHGDH-230ENST00000641927 SLIT3O75094 1523 aa23.51■■□□□ 1.35
PHGDH-230ENST00000641927 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
PHGDH-230ENST00000641927 PNPLA6Q8IY17 1366 aa23.48■■□□□ 1.35
PHGDH-230ENST00000641927 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
PHGDH-230ENST00000641927 PHRF1Q9P1Y6 1649 aaKnown RBP23.48■■□□□ 1.35
PHGDH-230ENST00000641927 NFAT5O94916 1531 aa23.48■■□□□ 1.35
PHGDH-230ENST00000641927 AMPHP49418 695 aa23.48■■□□□ 1.35
PHGDH-230ENST00000641927 ZC3H6P61129 1189 aaKnown RBP23.48■■□□□ 1.35
PHGDH-230ENST00000641927 HSPA1LP34931 641 aa23.47■■□□□ 1.35
PHGDH-230ENST00000641927 CRYBG1Q9Y4K1 1723 aa23.45■■□□□ 1.34
PHGDH-230ENST00000641927 SMG6Q86US8 1419 aaKnown RBP23.44■■□□□ 1.34
PHGDH-230ENST00000641927 ARHGEF25Q86VW2 580 aa23.43■■□□□ 1.34
PHGDH-230ENST00000641927 LTN1O94822 1766 aa23.43■■□□□ 1.34
PHGDH-230ENST00000641927 CDK12Q9NYV4 1490 aaPredicted RBP23.42■■□□□ 1.34
PHGDH-230ENST00000641927 COL22A1Q8NFW1 1626 aaPredicted RBP23.42■■□□□ 1.34
PHGDH-230ENST00000641927 ABCA3Q99758 1704 aa23.42■■□□□ 1.34
PHGDH-230ENST00000641927 FLT4P35916 1363 aa23.41■■□□□ 1.34
PHGDH-230ENST00000641927 JCADQ9P266 1359 aa23.41■■□□□ 1.34
PHGDH-230ENST00000641927 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
PHGDH-230ENST00000641927 FAM9BQ8IZU0 186 aa23.41■■□□□ 1.34
PHGDH-230ENST00000641927 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
PHGDH-230ENST00000641927 KIAA0232Q92628 1395 aa23.4■■□□□ 1.34
PHGDH-230ENST00000641927 NUTM2BA6NNL0 878 aaPredicted RBP23.39■■□□□ 1.34
PHGDH-230ENST00000641927 NUTM2EB1AL46 878 aaPredicted RBP23.39■■□□□ 1.34
PHGDH-230ENST00000641927 DIAPH1O60610 1272 aaKnown RBP23.39■■□□□ 1.34
PHGDH-230ENST00000641927 HOXC9P31274 260 aa23.39■■□□□ 1.34
PHGDH-230ENST00000641927 NUTM2AQ8IVF1 878 aaPredicted RBP23.39■■□□□ 1.34
PHGDH-230ENST00000641927 RTL1A6NKG5 1358 aa23.38■■□□□ 1.33
PHGDH-230ENST00000641927 KIF24Q5T7B8 1368 aa23.38■■□□□ 1.33
PHGDH-230ENST00000641927 WDR43Q15061 677 aaKnown RBP eCLIP23.38■■□□□ 1.33
PHGDH-230ENST00000641927 PRDM11Q9NQV5 511 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms