RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 PIK3C2BO00750 1634 aa16.02■□□□□ 0.16
CASC19-229ENST00000641418 HDGFP51858 240 aaKnown RBP16.01■□□□□ 0.15
CASC19-229ENST00000641418 ITGAEP38570 1179 aa16■□□□□ 0.15
CASC19-229ENST00000641418 DOK7Q18PE1 504 aa16■□□□□ 0.15
CASC19-229ENST00000641418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16■□□□□ 0.15
CASC19-229ENST00000641418 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
CASC19-229ENST00000641418 SYNMO15061 1565 aa16■□□□□ 0.15
CASC19-229ENST00000641418 CFAP65Q6ZU64 1925 aaKnown RBP15.99■□□□□ 0.15
CASC19-229ENST00000641418 ALKQ9UM73 1620 aa15.99■□□□□ 0.15
CASC19-229ENST00000641418 RIMBP2O15034 1052 aa15.99■□□□□ 0.15
CASC19-229ENST00000641418 PROSER2Q86WR7 435 aaPredicted RBP15.99■□□□□ 0.15
CASC19-229ENST00000641418 TPRNQ4KMQ1 711 aa15.98■□□□□ 0.15
CASC19-229ENST00000641418 LMOD2Q6P5Q4 547 aa15.98■□□□□ 0.15
CASC19-229ENST00000641418 ADGRB3O60242 1522 aa15.97■□□□□ 0.15
CASC19-229ENST00000641418 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
CASC19-229ENST00000641418 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
CASC19-229ENST00000641418 STRCP1A6NGW2 1772 aa15.97■□□□□ 0.15
CASC19-229ENST00000641418 KDM5AP29375 1690 aaKnown RBP15.96■□□□□ 0.15
CASC19-229ENST00000641418 NUP155O75694 1391 aa15.96■□□□□ 0.15
CASC19-229ENST00000641418 SNPHO15079 494 aa15.96■□□□□ 0.15
CASC19-229ENST00000641418 EVI5O60447 810 aa15.96■□□□□ 0.15
CASC19-229ENST00000641418 TET3O43151 1660 aa15.95■□□□□ 0.14
CASC19-229ENST00000641418 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.95■□□□□ 0.14
CASC19-229ENST00000641418 PLEKHG1Q9ULL1 1385 aa15.94■□□□□ 0.14
CASC19-229ENST00000641418 LHX8Q68G74 356 aa15.94■□□□□ 0.14
CASC19-229ENST00000641418 RBM33Q96EV2 1170 aaKnown RBP15.94■□□□□ 0.14
CASC19-229ENST00000641418 ZFYVE9O95405 1425 aa15.94■□□□□ 0.14
CASC19-229ENST00000641418 RIMS2Q9UQ26 1411 aa15.94■□□□□ 0.14
CASC19-229ENST00000641418 ZSWIM6Q9HCJ5 1215 aa15.93■□□□□ 0.14
CASC19-229ENST00000641418 TBX22Q9Y458 520 aa15.93■□□□□ 0.14
CASC19-229ENST00000641418 PCDHGA4Q9Y5G9 962 aa15.93■□□□□ 0.14
CASC19-229ENST00000641418 PTGER2P43116 358 aa15.92■□□□□ 0.14
CASC19-229ENST00000641418 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
CASC19-229ENST00000641418 MLLT3P42568 568 aaPredicted RBP15.91■□□□□ 0.14
CASC19-229ENST00000641418 UNC13BO14795 1591 aa15.91■□□□□ 0.14
CASC19-229ENST00000641418 MED1Q15648 1581 aaPredicted RBP15.91■□□□□ 0.14
CASC19-229ENST00000641418 ZNF710Q8N1W2 664 aa15.9■□□□□ 0.14
CASC19-229ENST00000641418 NUTM2DQ5VT03 806 aaPredicted RBP15.89■□□□□ 0.13
CASC19-229ENST00000641418 ANO8Q9HCE9 1232 aaPredicted RBP15.89■□□□□ 0.13
CASC19-229ENST00000641418 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
CASC19-229ENST00000641418 OTUD5Q96G74 571 aa15.87■□□□□ 0.13
CASC19-229ENST00000641418 MSH6P52701 1360 aa15.87■□□□□ 0.13
CASC19-229ENST00000641418 HOXB3P14651 431 aaPredicted RBP15.87■□□□□ 0.13
CASC19-229ENST00000641418 SLAIN2Q9P270 581 aa15.87■□□□□ 0.13
CASC19-229ENST00000641418 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
CASC19-229ENST00000641418 GRXCR2A6NFK2 248 aa15.86■□□□□ 0.13
CASC19-229ENST00000641418 PRKCSHP14314 528 aaPredicted RBP15.85■□□□□ 0.13
CASC19-229ENST00000641418 GCC2Q8IWJ2 1684 aa15.84■□□□□ 0.13
CASC19-229ENST00000641418 IQGAP3Q86VI3 1631 aa15.84■□□□□ 0.13
CASC19-229ENST00000641418 NWD1Q149M9 1564 aa15.84■□□□□ 0.13
CASC19-229ENST00000641418 ADAMTS13Q76LX8 1427 aa15.84■□□□□ 0.13
CASC19-229ENST00000641418 RRBP1Q9P2E9 1410 aaKnown RBP15.84■□□□□ 0.13
CASC19-229ENST00000641418 NCOA3Q9Y6Q9 1424 aa15.83■□□□□ 0.12
CASC19-229ENST00000641418 PIK3R4Q99570 1358 aa15.83■□□□□ 0.12
CASC19-229ENST00000641418 E9PCH4 1651 aa15.82■□□□□ 0.12
CASC19-229ENST00000641418 C14orf37Q86TY3 774 aa15.82■□□□□ 0.12
CASC19-229ENST00000641418 ZNF326Q5BKZ1 582 aaKnown RBP15.81■□□□□ 0.12
CASC19-229ENST00000641418 DDX12PQ92771 950 aa15.81■□□□□ 0.12
CASC19-229ENST00000641418 AMOTL2Q9Y2J4 779 aa15.81■□□□□ 0.12
CASC19-229ENST00000641418 C19orf44Q9H6X5 657 aa15.8■□□□□ 0.12
CASC19-229ENST00000641418 XIRP1Q702N8 1843 aaKnown RBP15.79■□□□□ 0.12
CASC19-229ENST00000641418 ARSIQ5FYB1 569 aa15.79■□□□□ 0.12
CASC19-229ENST00000641418 NAIPQ13075 1403 aa15.79■□□□□ 0.12
CASC19-229ENST00000641418 EPAS1Q99814 870 aa15.78■□□□□ 0.12
CASC19-229ENST00000641418 RGS17Q9UGC6 210 aaPredicted RBP15.78■□□□□ 0.12
CASC19-229ENST00000641418 PHF14O94880 888 aa15.77■□□□□ 0.12
CASC19-229ENST00000641418 ATF3P18847 181 aa15.77■□□□□ 0.12
CASC19-229ENST00000641418 RBM26Q5T8P6 1007 aaKnown RBP15.77■□□□□ 0.12
CASC19-229ENST00000641418 GPR153Q6NV75 609 aa15.77■□□□□ 0.12
CASC19-229ENST00000641418 TRIM52Q96A61 297 aa15.77■□□□□ 0.12
CASC19-229ENST00000641418 DIP2AQ14689 1571 aa15.76■□□□□ 0.11
CASC19-229ENST00000641418 OSBPP22059 807 aa15.75■□□□□ 0.11
CASC19-229ENST00000641418 GPIHBP1Q8IV16 184 aa15.75■□□□□ 0.11
CASC19-229ENST00000641418 PTPRUQ92729 1446 aa15.75■□□□□ 0.11
CASC19-229ENST00000641418 NUDT7P0C024 238 aa15.75■□□□□ 0.11
CASC19-229ENST00000641418 ZC3H15Q8WU90 426 aaKnown RBP15.75■□□□□ 0.11
CASC19-229ENST00000641418 ROBO1Q9Y6N7 1651 aa15.74■□□□□ 0.11
CASC19-229ENST00000641418 JCADQ9P266 1359 aa15.74■□□□□ 0.11
CASC19-229ENST00000641418 TRPM2O94759 1503 aa15.73■□□□□ 0.11
CASC19-229ENST00000641418 CHD2O14647 1828 aaKnown RBP15.72■□□□□ 0.11
CASC19-229ENST00000641418 MYO5BQ9ULV0 1848 aa15.72■□□□□ 0.11
CASC19-229ENST00000641418 HFM1A2PYH4 1435 aa15.72■□□□□ 0.11
CASC19-229ENST00000641418 METP08581 1390 aa15.72■□□□□ 0.11
CASC19-229ENST00000641418 FBXW7Q969H0 707 aa15.71■□□□□ 0.11
CASC19-229ENST00000641418 PSDA5PKW4 1024 aaPredicted RBP15.7■□□□□ 0.1
CASC19-229ENST00000641418 TYW1BQ6NUM6 668 aa15.7■□□□□ 0.1
CASC19-229ENST00000641418 POTEAQ6S8J7 498 aa15.7■□□□□ 0.1
CASC19-229ENST00000641418 HOXB1P14653 301 aaPredicted RBP15.69■□□□□ 0.1
CASC19-229ENST00000641418 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
CASC19-229ENST00000641418 KHSRPQ92945 711 aaKnown RBP eCLIP15.69■□□□□ 0.17e-7■□□□□ 9.8
CASC19-229ENST00000641418 SETBP1Q9Y6X0 1596 aa15.69■□□□□ 0.1
CASC19-229ENST00000641418 RPGRIP1LQ68CZ1 1315 aa15.69■□□□□ 0.1
CASC19-229ENST00000641418 NUTM2FA1L443 756 aa15.68■□□□□ 0.1
CASC19-229ENST00000641418 PCDHGA10Q9Y5H3 936 aa15.68■□□□□ 0.1
CASC19-229ENST00000641418 SPATA31A6Q5VVP1 1343 aa15.67■□□□□ 0.1
CASC19-229ENST00000641418 DCCP43146 1447 aa15.66■□□□□ 0.1
CASC19-229ENST00000641418 FOSBP53539 338 aa15.66■□□□□ 0.1
CASC19-229ENST00000641418 SPHKAPQ2M3C7 1700 aa15.66■□□□□ 0.1
CASC19-229ENST00000641418 CLTCL1P53675 1640 aa15.65■□□□□ 0.1
CASC19-229ENST00000641418 NEXMIFQ5QGS0 1516 aa15.64■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms