RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 ANO8Q9HCE9 1232 aaPredicted RBP8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 PPIP5K1Q6PFW1 1433 aa8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 NRAPQ86VF7 1730 aa8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 NUDT16Q96DE0 195 aaKnown RBP8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 NPHP3Q7Z494 1330 aa8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 PLCH1Q4KWH8 1693 aa8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 NWD2Q9ULI1 1742 aa8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 BRD4O60885 1362 aaPredicted RBP8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 SPATA31A6Q5VVP1 1343 aa8.12□□□□□ -1.11
PRICKLE1-220ENST00000640840 SLIT3O75094 1523 aa8.11□□□□□ -1.11
PRICKLE1-220ENST00000640840 SPATA31A3Q5VYP0 1347 aa8.11□□□□□ -1.11
PRICKLE1-220ENST00000640840 ESCO1Q5FWF5 840 aa8.11□□□□□ -1.11
PRICKLE1-220ENST00000640840 DISP3Q9P2K9 1392 aa8.11□□□□□ -1.11
PRICKLE1-220ENST00000640840 FKBP8Q14318 412 aa8.11□□□□□ -1.11
PRICKLE1-220ENST00000640840 EVC2Q86UK5 1308 aa8.11□□□□□ -1.11
PRICKLE1-220ENST00000640840 USP6P35125 1406 aa8.1□□□□□ -1.11
PRICKLE1-220ENST00000640840 KCNA4P22459 653 aa8.1□□□□□ -1.11
PRICKLE1-220ENST00000640840 CCDC61Q9Y6R9 512 aa8.1□□□□□ -1.11
PRICKLE1-220ENST00000640840 LMO7Q8WWI1 1683 aa8.1□□□□□ -1.11
PRICKLE1-220ENST00000640840 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
PRICKLE1-220ENST00000640840 ST20-MTHFSA0A0A6YYL1 179 aa8.1□□□□□ -1.11
PRICKLE1-220ENST00000640840 LRRC59Q96AG4 307 aaKnown RBP8.1□□□□□ -1.11
PRICKLE1-220ENST00000640840 COL18A1P39060 1754 aa8.1□□□□□ -1.11
PRICKLE1-220ENST00000640840 KIF20BQ96Q89 1820 aa8.09□□□□□ -1.11
PRICKLE1-220ENST00000640840 NINLQ9Y2I6 1382 aa8.09□□□□□ -1.11
PRICKLE1-220ENST00000640840 CABP2Q9NPB3 220 aa8.09□□□□□ -1.11
PRICKLE1-220ENST00000640840 COL14A1Q05707 1796 aaKnown RBP8.09□□□□□ -1.11
PRICKLE1-220ENST00000640840 FOXO3O43524 673 aa8.08□□□□□ -1.12
PRICKLE1-220ENST00000640840 ANKRD26Q9UPS8 1709 aa8.08□□□□□ -1.12
PRICKLE1-220ENST00000640840 NUTM2FA1L443 756 aa8.08□□□□□ -1.12
PRICKLE1-220ENST00000640840 ACEP12821 1306 aa8.08□□□□□ -1.12
PRICKLE1-220ENST00000640840 KRT28Q7Z3Y7 464 aa8.08□□□□□ -1.12
PRICKLE1-220ENST00000640840 NFAT5O94916 1531 aa8.08□□□□□ -1.12
PRICKLE1-220ENST00000640840 RGS17Q9UGC6 210 aaPredicted RBP8.07□□□□□ -1.12
PRICKLE1-220ENST00000640840 ARHGEF10O15013 1369 aa8.07□□□□□ -1.12
PRICKLE1-220ENST00000640840 USP19O94966 1318 aa8.07□□□□□ -1.12
PRICKLE1-220ENST00000640840 ABCC6O95255 1503 aa8.07□□□□□ -1.12
PRICKLE1-220ENST00000640840 SLIT2O94813 1529 aa8.06□□□□□ -1.12
PRICKLE1-220ENST00000640840 PMFBP1Q8TBY8 1022 aa8.06□□□□□ -1.12
PRICKLE1-220ENST00000640840 CABP1Q9NZU7 370 aa8.06□□□□□ -1.12
PRICKLE1-220ENST00000640840 USP31Q70CQ4 1352 aa8.06□□□□□ -1.12
PRICKLE1-220ENST00000640840 PSME1Q06323 249 aa8.05□□□□□ -1.12
PRICKLE1-220ENST00000640840 A0A1W2PP64 1363 aa8.05□□□□□ -1.12
PRICKLE1-220ENST00000640840 LTN1O94822 1766 aa8.05□□□□□ -1.12
PRICKLE1-220ENST00000640840 WNK3Q9BYP7 1800 aa8.05□□□□□ -1.12
PRICKLE1-220ENST00000640840 SRPK2P78362 688 aaKnown RBP8.05□□□□□ -1.12
PRICKLE1-220ENST00000640840 HOMEZQ8IX15 550 aa8.05□□□□□ -1.12
PRICKLE1-220ENST00000640840 EDC4Q6P2E9 1401 aaKnown RBP8.05□□□□□ -1.12
PRICKLE1-220ENST00000640840 BCL9LQ86UU0 1499 aa8.04□□□□□ -1.12
PRICKLE1-220ENST00000640840 XPCQ01831 940 aaPredicted RBP8.04□□□□□ -1.12
PRICKLE1-220ENST00000640840 ANKRD36BQ8N2N9 1353 aa8.04□□□□□ -1.12
PRICKLE1-220ENST00000640840 OVOS2A0A0J9YW53 1432 aa8.04□□□□□ -1.12
PRICKLE1-220ENST00000640840 OVOS2Q6IE36 1432 aa8.04□□□□□ -1.12
PRICKLE1-220ENST00000640840 HSPA5P11021 654 aaKnown RBP8.04□□□□□ -1.12
PRICKLE1-220ENST00000640840 RGPD5Q99666 1765 aa8.04□□□□□ -1.12
PRICKLE1-220ENST00000640840 CPDO75976 1380 aa8.03□□□□□ -1.12
PRICKLE1-220ENST00000640840 ATRNO75882 1429 aa8.03□□□□□ -1.12
PRICKLE1-220ENST00000640840 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
PRICKLE1-220ENST00000640840 GLI3P10071 1580 aa8.03□□□□□ -1.12
PRICKLE1-220ENST00000640840 C11orf95C9JLR9 678 aaPredicted RBP8.03□□□□□ -1.12
PRICKLE1-220ENST00000640840 TMF1P82094 1093 aa8.03□□□□□ -1.12
PRICKLE1-220ENST00000640840 FNBP4Q8N3X1 1017 aaPredicted RBP8.03□□□□□ -1.12
PRICKLE1-220ENST00000640840 TTC21AQ8NDW8 1320 aa8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 TULP1O00294 542 aaPredicted RBP8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 EIF4G2P78344 907 aaKnown RBP eCLIP8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 CDK12Q9NYV4 1490 aaPredicted RBP8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 KTN1Q86UP2 1357 aaKnown RBP8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 THSD7AQ9UPZ6 1657 aa8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 TTC21BQ7Z4L5 1316 aa8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 NGDNQ8NEJ9 315 aaKnown RBP8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 CCDC136Q96JN2 1154 aa8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 SLC12A5Q9H2X9 1139 aa8.02□□□□□ -1.13
PRICKLE1-220ENST00000640840 CAMTA1Q9Y6Y1 1673 aa8.01□□□□□ -1.13
PRICKLE1-220ENST00000640840 PEAK1Q9H792 1746 aa8.01□□□□□ -1.13
PRICKLE1-220ENST00000640840 SALL2Q9Y467 1007 aaPredicted RBP8.01□□□□□ -1.13
PRICKLE1-220ENST00000640840 FAM208AQ9UK61 1670 aaKnown RBP8□□□□□ -1.13
PRICKLE1-220ENST00000640840 DEKP35659 375 aaKnown RBP8□□□□□ -1.13
PRICKLE1-220ENST00000640840 CDCA8Q53HL2 280 aa8□□□□□ -1.13
PRICKLE1-220ENST00000640840 CARD14Q9BXL6 1004 aa8□□□□□ -1.13
PRICKLE1-220ENST00000640840 BRWD3Q6RI45 1802 aa7.99□□□□□ -1.13
PRICKLE1-220ENST00000640840 KIF7Q2M1P5 1343 aa7.98□□□□□ -1.13
PRICKLE1-220ENST00000640840 POTEAQ6S8J7 498 aa7.98□□□□□ -1.13
PRICKLE1-220ENST00000640840 PARP4Q9UKK3 1724 aaKnown RBP7.98□□□□□ -1.13
PRICKLE1-220ENST00000640840 FAM83GA6ND36 823 aa7.98□□□□□ -1.13
PRICKLE1-220ENST00000640840 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
PRICKLE1-220ENST00000640840 AFF2P51816 1311 aa7.98□□□□□ -1.13
PRICKLE1-220ENST00000640840 TERF2IPQ9NYB0 399 aa7.98□□□□□ -1.13
PRICKLE1-220ENST00000640840 COL5A2P05997 1499 aaPredicted RBP7.97□□□□□ -1.13
PRICKLE1-220ENST00000640840 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
PRICKLE1-220ENST00000640840 KIAA0232Q92628 1395 aa7.97□□□□□ -1.13
PRICKLE1-220ENST00000640840 CCDC7Q96M83 1385 aa7.97□□□□□ -1.13
PRICKLE1-220ENST00000640840 ABTB2Q8N961 1025 aa7.97□□□□□ -1.13
PRICKLE1-220ENST00000640840 MAP2P11137 1827 aaKnown RBP7.97□□□□□ -1.13
PRICKLE1-220ENST00000640840 ILDR2Q71H61 639 aa7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 WASHC2AQ641Q2 1341 aa7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 NSD3Q9BZ95 1437 aa7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 NUTM2BA6NNL0 878 aaPredicted RBP7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 NUTM2EB1AL46 878 aaPredicted RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms