RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 DCAF11Q8TEB1 546 aa16.97■□□□□ 0.31
ERGIC3-220ENST00000640748 KRT27Q7Z3Y8 459 aa16.96■□□□□ 0.31
ERGIC3-220ENST00000640748 CCDC9Q9Y3X0 531 aaKnown RBP16.96■□□□□ 0.31
ERGIC3-220ENST00000640748 EIF3AQ14152 1382 aaKnown RBP16.95■□□□□ 0.3
ERGIC3-220ENST00000640748 GPRASP1Q5JY77 1395 aa16.95■□□□□ 0.3
ERGIC3-220ENST00000640748 BTG4Q9NY30 223 aa16.95■□□□□ 0.3
ERGIC3-220ENST00000640748 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
ERGIC3-220ENST00000640748 CRYBG1Q9Y4K1 1723 aa16.94■□□□□ 0.3
ERGIC3-220ENST00000640748 ZNF316A6NFI3 1004 aaPredicted RBP16.93■□□□□ 0.3
ERGIC3-220ENST00000640748 FAM98CQ17RN3 349 aaKnown RBP16.93■□□□□ 0.3
ERGIC3-220ENST00000640748 ATP7BP35670 1465 aa16.93■□□□□ 0.3
ERGIC3-220ENST00000640748 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
ERGIC3-220ENST00000640748 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
ERGIC3-220ENST00000640748 ARHGEF28Q8N1W1 1705 aaKnown RBP16.91■□□□□ 0.3
ERGIC3-220ENST00000640748 SPATA31A5Q5VU36 1347 aa16.91■□□□□ 0.3
ERGIC3-220ENST00000640748 SPATA31A7Q8IWB4 1347 aa16.91■□□□□ 0.3
ERGIC3-220ENST00000640748 NGDNQ8NEJ9 315 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-220ENST00000640748 SF3B2Q13435 895 aaKnown RBP16.89■□□□□ 0.29
ERGIC3-220ENST00000640748 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
ERGIC3-220ENST00000640748 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
ERGIC3-220ENST00000640748 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
ERGIC3-220ENST00000640748 A0A0G2JS52 829 aa16.87■□□□□ 0.29
ERGIC3-220ENST00000640748 MYT1Q01538 1121 aa16.87■□□□□ 0.29
ERGIC3-220ENST00000640748 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
ERGIC3-220ENST00000640748 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
ERGIC3-220ENST00000640748 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
ERGIC3-220ENST00000640748 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
ERGIC3-220ENST00000640748 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
ERGIC3-220ENST00000640748 ITSN1Q15811 1721 aa16.84■□□□□ 0.29
ERGIC3-220ENST00000640748 BAG6P46379 1132 aa16.84■□□□□ 0.29
ERGIC3-220ENST00000640748 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
ERGIC3-220ENST00000640748 SPATA31A1Q5TZJ5 1347 aa16.84■□□□□ 0.29
ERGIC3-220ENST00000640748 TOPAZ1Q8N9V7 1692 aa16.84■□□□□ 0.29
ERGIC3-220ENST00000640748 LRP5O75197 1615 aa16.83■□□□□ 0.28
ERGIC3-220ENST00000640748 NUTM2GQ5VZR2 741 aa16.83■□□□□ 0.28
ERGIC3-220ENST00000640748 PHRF1Q9P1Y6 1649 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-220ENST00000640748 ACEP12821 1306 aa16.82■□□□□ 0.28
ERGIC3-220ENST00000640748 PLEKHG3A1L390 1219 aa16.82■□□□□ 0.28
ERGIC3-220ENST00000640748 PSDA5PKW4 1024 aaPredicted RBP16.82■□□□□ 0.28
ERGIC3-220ENST00000640748 EN1Q05925 392 aaPredicted RBP16.82■□□□□ 0.28
ERGIC3-220ENST00000640748 NBPF1Q3BBV0 1214 aa16.82■□□□□ 0.28
ERGIC3-220ENST00000640748 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
ERGIC3-220ENST00000640748 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
ERGIC3-220ENST00000640748 DISP2A7MBM2 1401 aa16.81■□□□□ 0.28
ERGIC3-220ENST00000640748 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
ERGIC3-220ENST00000640748 TNS1Q9HBL0 1735 aaKnown RBP16.8■□□□□ 0.28
ERGIC3-220ENST00000640748 KIAA1210Q9ULL0 1709 aa16.8■□□□□ 0.28
ERGIC3-220ENST00000640748 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
ERGIC3-220ENST00000640748 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
ERGIC3-220ENST00000640748 NRKQ7Z2Y5 1582 aa16.79■□□□□ 0.28
ERGIC3-220ENST00000640748 USP19O94966 1318 aa16.78■□□□□ 0.28
ERGIC3-220ENST00000640748 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
ERGIC3-220ENST00000640748 SSH2Q76I76 1423 aa16.78■□□□□ 0.28
ERGIC3-220ENST00000640748 CPDO75976 1380 aa16.77■□□□□ 0.27
ERGIC3-220ENST00000640748 LMO7Q8WWI1 1683 aa16.76■□□□□ 0.27
ERGIC3-220ENST00000640748 TRIM37O94972 964 aa16.75■□□□□ 0.27
ERGIC3-220ENST00000640748 EZH2Q15910 746 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-220ENST00000640748 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-220ENST00000640748 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-220ENST00000640748 BARGINQ6ZT62 677 aa16.75■□□□□ 0.27
ERGIC3-220ENST00000640748 ABTB2Q8N961 1025 aa16.75■□□□□ 0.27
ERGIC3-220ENST00000640748 CAMKK2Q96RR4 588 aa16.75■□□□□ 0.27
ERGIC3-220ENST00000640748 USP35Q9P2H5 1018 aa16.75■□□□□ 0.27
ERGIC3-220ENST00000640748 PPIP5K1Q6PFW1 1433 aa16.74■□□□□ 0.27
ERGIC3-220ENST00000640748 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
ERGIC3-220ENST00000640748 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
ERGIC3-220ENST00000640748 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
ERGIC3-220ENST00000640748 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
ERGIC3-220ENST00000640748 CENPJQ9HC77 1338 aaPredicted RBP16.72■□□□□ 0.27
ERGIC3-220ENST00000640748 EVA1CP58658 441 aa16.72■□□□□ 0.27
ERGIC3-220ENST00000640748 GCP02774 474 aa16.71■□□□□ 0.27
ERGIC3-220ENST00000640748 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
ERGIC3-220ENST00000640748 TCP11L2Q8N4U5 519 aa16.71■□□□□ 0.27
ERGIC3-220ENST00000640748 COL5A2P05997 1499 aaPredicted RBP16.7■□□□□ 0.26
ERGIC3-220ENST00000640748 APBA3O96018 575 aa16.69■□□□□ 0.26
ERGIC3-220ENST00000640748 NLRP13Q86W25 1043 aa16.69■□□□□ 0.26
ERGIC3-220ENST00000640748 USP6P35125 1406 aa16.69■□□□□ 0.26
ERGIC3-220ENST00000640748 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
ERGIC3-220ENST00000640748 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
ERGIC3-220ENST00000640748 QRICH2Q9H0J4 1663 aa16.68■□□□□ 0.26
ERGIC3-220ENST00000640748 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-220ENST00000640748 PDE3BQ13370 1112 aa16.67■□□□□ 0.26
ERGIC3-220ENST00000640748 THRAP3Q9Y2W1 955 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-220ENST00000640748 SLIT3O75094 1523 aa16.66■□□□□ 0.26
ERGIC3-220ENST00000640748 RREB1Q92766 1687 aa16.65■□□□□ 0.26
ERGIC3-220ENST00000640748 AATKQ6ZMQ8 1374 aa16.65■□□□□ 0.26
ERGIC3-220ENST00000640748 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
ERGIC3-220ENST00000640748 CRB1P82279 1406 aa16.64■□□□□ 0.25
ERGIC3-220ENST00000640748 NLRP6P59044 892 aa16.64■□□□□ 0.25
ERGIC3-220ENST00000640748 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
ERGIC3-220ENST00000640748 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
ERGIC3-220ENST00000640748 PEAK1Q9H792 1746 aa16.63■□□□□ 0.25
ERGIC3-220ENST00000640748 COL18A1P39060 1754 aa16.62■□□□□ 0.25
ERGIC3-220ENST00000640748 AXIN2Q9Y2T1 843 aa16.62■□□□□ 0.25
ERGIC3-220ENST00000640748 TRPM1Q7Z4N2 1603 aa16.61■□□□□ 0.25
ERGIC3-220ENST00000640748 LRRC37A3O60309 1634 aa16.6■□□□□ 0.25
ERGIC3-220ENST00000640748 ZBTB7CA1YPR0 619 aa16.6■□□□□ 0.25
ERGIC3-220ENST00000640748 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
ERGIC3-220ENST00000640748 PTF1AQ7RTS3 328 aa16.59■□□□□ 0.25
ERGIC3-220ENST00000640748 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms