RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 QRICH2Q9H0J4 1663 aa19.85■□□□□ 0.77
RTTN-221ENST00000640736 TRPM1Q7Z4N2 1603 aa19.85■□□□□ 0.77
RTTN-221ENST00000640736 PAK3O75914 559 aaPredicted RBP19.84■□□□□ 0.77
RTTN-221ENST00000640736 UNC5CLQ8IV45 518 aa19.84■□□□□ 0.77
RTTN-221ENST00000640736 CENPJQ9HC77 1338 aaPredicted RBP19.83■□□□□ 0.77
RTTN-221ENST00000640736 NWD2Q9ULI1 1742 aa19.82■□□□□ 0.76
RTTN-221ENST00000640736 GJD4Q96KN9 370 aaPredicted RBP19.82■□□□□ 0.76
RTTN-221ENST00000640736 CRYBG1Q9Y4K1 1723 aa19.8■□□□□ 0.76
RTTN-221ENST00000640736 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
RTTN-221ENST00000640736 SRPK2P78362 688 aaKnown RBP19.8■□□□□ 0.76
RTTN-221ENST00000640736 RALGAPBQ86X10 1494 aa19.79■□□□□ 0.76
RTTN-221ENST00000640736 GLI3P10071 1580 aa19.79■□□□□ 0.76
RTTN-221ENST00000640736 CCDC61Q9Y6R9 512 aa19.79■□□□□ 0.76
RTTN-221ENST00000640736 ROCK2O75116 1388 aaKnown RBP19.79■□□□□ 0.76
RTTN-221ENST00000640736 ACEP12821 1306 aa19.78■□□□□ 0.76
RTTN-221ENST00000640736 FAM83GA6ND36 823 aa19.78■□□□□ 0.76
RTTN-221ENST00000640736 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.76
RTTN-221ENST00000640736 CABP2Q9NPB3 220 aa19.77■□□□□ 0.76
RTTN-221ENST00000640736 POLR3AO14802 1390 aaPredicted RBP19.77■□□□□ 0.76
RTTN-221ENST00000640736 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
RTTN-221ENST00000640736 COL14A1Q05707 1796 aaKnown RBP19.76■□□□□ 0.75
RTTN-221ENST00000640736 NBPF8Q3BBV2 869 aa19.76■□□□□ 0.75
RTTN-221ENST00000640736 CCDC9Q9Y3X0 531 aaKnown RBP19.76■□□□□ 0.75
RTTN-221ENST00000640736 NRAPQ86VF7 1730 aa19.76■□□□□ 0.75
RTTN-221ENST00000640736 PPIP5K1Q6PFW1 1433 aa19.76■□□□□ 0.75
RTTN-221ENST00000640736 BRWD3Q6RI45 1802 aa19.75■□□□□ 0.75
RTTN-221ENST00000640736 PLEKHG3A1L390 1219 aa19.75■□□□□ 0.75
RTTN-221ENST00000640736 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
RTTN-221ENST00000640736 PHRF1Q9P1Y6 1649 aaKnown RBP19.75■□□□□ 0.75
RTTN-221ENST00000640736 VPS72Q15906 364 aa19.74■□□□□ 0.75
RTTN-221ENST00000640736 BTG4Q9NY30 223 aa19.73■□□□□ 0.75
RTTN-221ENST00000640736 DCAF8L1A6NGE4 600 aa19.72■□□□□ 0.75
RTTN-221ENST00000640736 KCNA4P22459 653 aa19.72■□□□□ 0.75
RTTN-221ENST00000640736 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
RTTN-221ENST00000640736 PRDM11Q9NQV5 511 aa19.7■□□□□ 0.74
RTTN-221ENST00000640736 EVC2Q86UK5 1308 aa19.7■□□□□ 0.74
RTTN-221ENST00000640736 SEPT12Q8IYM1 358 aa19.69■□□□□ 0.74
RTTN-221ENST00000640736 ABTB2Q8N961 1025 aa19.69■□□□□ 0.74
RTTN-221ENST00000640736 CABP1Q9NZU7 370 aa19.68■□□□□ 0.74
RTTN-221ENST00000640736 KIAA0232Q92628 1395 aa19.68■□□□□ 0.74
RTTN-221ENST00000640736 EP400Q96L91 3159 aa19.67■□□□□ 0.74
RTTN-221ENST00000640736 CHRNA2Q15822 529 aa19.67■□□□□ 0.74
RTTN-221ENST00000640736 A0A0G2JS52 829 aa19.66■□□□□ 0.74
RTTN-221ENST00000640736 ZC3H6P61129 1189 aaKnown RBP19.66■□□□□ 0.74
RTTN-221ENST00000640736 MYT1Q01538 1121 aa19.66■□□□□ 0.74
RTTN-221ENST00000640736 NRKQ7Z2Y5 1582 aa19.66■□□□□ 0.74
RTTN-221ENST00000640736 CARD11Q9BXL7 1154 aa19.65■□□□□ 0.74
RTTN-221ENST00000640736 FAM98CQ17RN3 349 aaKnown RBP19.64■□□□□ 0.73
RTTN-221ENST00000640736 USP6P35125 1406 aa19.64■□□□□ 0.73
RTTN-221ENST00000640736 ONECUT3O60422 494 aaPredicted RBP19.63■□□□□ 0.73
RTTN-221ENST00000640736 AKAP12Q02952 1782 aa19.62■□□□□ 0.73
RTTN-221ENST00000640736 USP19O94966 1318 aa19.62■□□□□ 0.73
RTTN-221ENST00000640736 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
RTTN-221ENST00000640736 STRN4Q9NRL3 753 aa19.62■□□□□ 0.73
RTTN-221ENST00000640736 BRD4O60885 1362 aaPredicted RBP19.61■□□□□ 0.73
RTTN-221ENST00000640736 SPATA31A5Q5VU36 1347 aa19.61■□□□□ 0.73
RTTN-221ENST00000640736 SPATA31A7Q8IWB4 1347 aa19.61■□□□□ 0.73
RTTN-221ENST00000640736 KRT27Q7Z3Y8 459 aa19.6■□□□□ 0.73
RTTN-221ENST00000640736 PIK3C2AO00443 1686 aa19.59■□□□□ 0.73
RTTN-221ENST00000640736 CCDC125Q86Z20 511 aa19.59■□□□□ 0.73
RTTN-221ENST00000640736 GCP02774 474 aa19.58■□□□□ 0.72
RTTN-221ENST00000640736 NLRP6P59044 892 aa19.58■□□□□ 0.72
RTTN-221ENST00000640736 CPDO75976 1380 aa19.57■□□□□ 0.72
RTTN-221ENST00000640736 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
RTTN-221ENST00000640736 LMO7Q8WWI1 1683 aa19.57■□□□□ 0.72
RTTN-221ENST00000640736 THSD7AQ9UPZ6 1657 aa19.57■□□□□ 0.72
RTTN-221ENST00000640736 CAMTA1Q9Y6Y1 1673 aa19.57■□□□□ 0.72
RTTN-221ENST00000640736 ZBTB7CA1YPR0 619 aa19.57■□□□□ 0.72
RTTN-221ENST00000640736 EVA1CP58658 441 aa19.57■□□□□ 0.72
RTTN-221ENST00000640736 BLMP54132 1417 aaPredicted RBP19.57■□□□□ 0.72
RTTN-221ENST00000640736 SSH2Q76I76 1423 aa19.57■□□□□ 0.72
RTTN-221ENST00000640736 SPATA31A1Q5TZJ5 1347 aa19.56■□□□□ 0.72
RTTN-221ENST00000640736 ZNF692Q9BU19 519 aaPredicted RBP19.56■□□□□ 0.72
RTTN-221ENST00000640736 USP35Q9P2H5 1018 aa19.55■□□□□ 0.72
RTTN-221ENST00000640736 SLIT3O75094 1523 aa19.55■□□□□ 0.72
RTTN-221ENST00000640736 TTC21BQ7Z4L5 1316 aa19.54■□□□□ 0.72
RTTN-221ENST00000640736 MON2Q7Z3U7 1717 aa19.54■□□□□ 0.72
RTTN-221ENST00000640736 SF3B2Q13435 895 aaKnown RBP19.53■□□□□ 0.72
RTTN-221ENST00000640736 KTN1Q86UP2 1357 aaKnown RBP19.53■□□□□ 0.72
RTTN-221ENST00000640736 CPSF1Q10570 1443 aaKnown RBP19.52■□□□□ 0.72
RTTN-221ENST00000640736 FAM182BQ5T319 152 aa19.52■□□□□ 0.72
RTTN-221ENST00000640736 LARP1Q6PKG0 1096 aaKnown RBP19.52■□□□□ 0.72
RTTN-221ENST00000640736 TMC1Q8TDI8 760 aa19.52■□□□□ 0.72
RTTN-221ENST00000640736 DEFB132Q7Z7B7 95 aa19.51■□□□□ 0.71
RTTN-221ENST00000640736 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
RTTN-221ENST00000640736 SOX12O15370 315 aa19.5■□□□□ 0.71
RTTN-221ENST00000640736 COL5A2P05997 1499 aaPredicted RBP19.49■□□□□ 0.71
RTTN-221ENST00000640736 COL18A1P39060 1754 aa19.48■□□□□ 0.71
RTTN-221ENST00000640736 RGPD5Q99666 1765 aa19.48■□□□□ 0.71
RTTN-221ENST00000640736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.48■□□□□ 0.71
RTTN-221ENST00000640736 ZRANB1Q9UGI0 708 aa19.48■□□□□ 0.71
RTTN-221ENST00000640736 RGPD1P0DJD0 1748 aa19.48■□□□□ 0.71
RTTN-221ENST00000640736 CD163L1Q9NR16 1453 aa19.48■□□□□ 0.71
RTTN-221ENST00000640736 AATKQ6ZMQ8 1374 aa19.47■□□□□ 0.71
RTTN-221ENST00000640736 ST20-MTHFSA0A0A6YYL1 179 aa19.47■□□□□ 0.71
RTTN-221ENST00000640736 TCP11L2Q8N4U5 519 aa19.47■□□□□ 0.71
RTTN-221ENST00000640736 PCGF6Q9BYE7 350 aa19.47■□□□□ 0.71
RTTN-221ENST00000640736 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
RTTN-221ENST00000640736 BARGINQ6ZT62 677 aa19.46■□□□□ 0.71
RTTN-221ENST00000640736 HDGFL2Q7Z4V5 671 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms