RNA–Protein interactions for RNA: ENST00000640154.1

CGREF1-209, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 5 BASIC

Gene CGREF1, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-209ENST00000640154 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
CGREF1-209ENST00000640154 SBNO2Q9Y2G9 1366 aa17.29■□□□□ 0.36
CGREF1-209ENST00000640154 CARD11Q9BXL7 1154 aa17.29■□□□□ 0.36
CGREF1-209ENST00000640154 NWD2Q9ULI1 1742 aa17.29■□□□□ 0.36
CGREF1-209ENST00000640154 PPIP5K1Q6PFW1 1433 aa17.29■□□□□ 0.36
CGREF1-209ENST00000640154 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
CGREF1-209ENST00000640154 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.36
CGREF1-209ENST00000640154 PLCH1Q4KWH8 1693 aa17.27■□□□□ 0.36
CGREF1-209ENST00000640154 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
CGREF1-209ENST00000640154 RGS12O14924 1447 aa17.27■□□□□ 0.35
CGREF1-209ENST00000640154 UNC5CLQ8IV45 518 aa17.26■□□□□ 0.35
CGREF1-209ENST00000640154 PCGF6Q9BYE7 350 aa17.26■□□□□ 0.35
CGREF1-209ENST00000640154 BRD4O60885 1362 aaPredicted RBP17.26■□□□□ 0.35
CGREF1-209ENST00000640154 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
CGREF1-209ENST00000640154 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
CGREF1-209ENST00000640154 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
CGREF1-209ENST00000640154 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
CGREF1-209ENST00000640154 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
CGREF1-209ENST00000640154 EP400Q96L91 3159 aa17.23■□□□□ 0.35
CGREF1-209ENST00000640154 GJD4Q96KN9 370 aaPredicted RBP17.22■□□□□ 0.35
CGREF1-209ENST00000640154 TIMELESSQ9UNS1 1208 aa17.22■□□□□ 0.35
CGREF1-209ENST00000640154 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
CGREF1-209ENST00000640154 AKAP12Q02952 1782 aa17.22■□□□□ 0.35
CGREF1-209ENST00000640154 USP6P35125 1406 aa17.21■□□□□ 0.35
CGREF1-209ENST00000640154 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
CGREF1-209ENST00000640154 GLI3P10071 1580 aa17.21■□□□□ 0.35
CGREF1-209ENST00000640154 SSH2Q76I76 1423 aa17.21■□□□□ 0.34
CGREF1-209ENST00000640154 VPS72Q15906 364 aa17.2■□□□□ 0.34
CGREF1-209ENST00000640154 USP19O94966 1318 aa17.2■□□□□ 0.34
CGREF1-209ENST00000640154 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
CGREF1-209ENST00000640154 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
CGREF1-209ENST00000640154 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
CGREF1-209ENST00000640154 NUTM2GQ5VZR2 741 aa17.17■□□□□ 0.34
CGREF1-209ENST00000640154 UPF1Q92900 1129 aaKnown RBP eCLIP17.17■□□□□ 0.34
CGREF1-209ENST00000640154 PUS7Q96PZ0 661 aaKnown RBP17.17■□□□□ 0.34
CGREF1-209ENST00000640154 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
CGREF1-209ENST00000640154 KIAA0232Q92628 1395 aa17.16■□□□□ 0.34
CGREF1-209ENST00000640154 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
CGREF1-209ENST00000640154 TESK2Q96S53 571 aa17.16■□□□□ 0.34
CGREF1-209ENST00000640154 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
CGREF1-209ENST00000640154 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
CGREF1-209ENST00000640154 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
CGREF1-209ENST00000640154 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
CGREF1-209ENST00000640154 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
CGREF1-209ENST00000640154 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
CGREF1-209ENST00000640154 CPDO75976 1380 aa17.15■□□□□ 0.34
CGREF1-209ENST00000640154 BRWD3Q6RI45 1802 aa17.14■□□□□ 0.33
CGREF1-209ENST00000640154 SLIT3O75094 1523 aa17.13■□□□□ 0.33
CGREF1-209ENST00000640154 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
CGREF1-209ENST00000640154 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
CGREF1-209ENST00000640154 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
CGREF1-209ENST00000640154 GCP02774 474 aa17.12■□□□□ 0.33
CGREF1-209ENST00000640154 NLRP6P59044 892 aa17.12■□□□□ 0.33
CGREF1-209ENST00000640154 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
CGREF1-209ENST00000640154 LMO7Q8WWI1 1683 aa17.12■□□□□ 0.33
CGREF1-209ENST00000640154 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
CGREF1-209ENST00000640154 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
CGREF1-209ENST00000640154 USP47Q96K76 1375 aa17.12■□□□□ 0.33
CGREF1-209ENST00000640154 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
CGREF1-209ENST00000640154 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
CGREF1-209ENST00000640154 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
CGREF1-209ENST00000640154 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
CGREF1-209ENST00000640154 CCER1Q8TC90 406 aaPredicted RBP17.09■□□□□ 0.33
CGREF1-209ENST00000640154 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
CGREF1-209ENST00000640154 CAMTA1Q9Y6Y1 1673 aa17.09■□□□□ 0.33
CGREF1-209ENST00000640154 NINLQ9Y2I6 1382 aa17.08■□□□□ 0.32
CGREF1-209ENST00000640154 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
CGREF1-209ENST00000640154 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
CGREF1-209ENST00000640154 SLC12A5Q9H2X9 1139 aa17.08■□□□□ 0.32
CGREF1-209ENST00000640154 COL18A1P39060 1754 aa17.07■□□□□ 0.32
CGREF1-209ENST00000640154 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
CGREF1-209ENST00000640154 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
CGREF1-209ENST00000640154 EDC4Q6P2E9 1401 aaKnown RBP17.05■□□□□ 0.32
CGREF1-209ENST00000640154 A0A1W2PP64 1363 aa17.05■□□□□ 0.32
CGREF1-209ENST00000640154 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
CGREF1-209ENST00000640154 USP31Q70CQ4 1352 aa17.05■□□□□ 0.32
CGREF1-209ENST00000640154 SPATA31A1Q5TZJ5 1347 aa17.05■□□□□ 0.32
CGREF1-209ENST00000640154 THSD7AQ9UPZ6 1657 aa17.05■□□□□ 0.32
CGREF1-209ENST00000640154 TMF1P82094 1093 aa17.04■□□□□ 0.32
CGREF1-209ENST00000640154 FAM98CQ17RN3 349 aaKnown RBP17.04■□□□□ 0.32
CGREF1-209ENST00000640154 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
CGREF1-209ENST00000640154 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
CGREF1-209ENST00000640154 NFAT5O94916 1531 aa17.04■□□□□ 0.32
CGREF1-209ENST00000640154 COL5A2P05997 1499 aaPredicted RBP17.03■□□□□ 0.32
CGREF1-209ENST00000640154 EVA1CP58658 441 aa17.02■□□□□ 0.32
CGREF1-209ENST00000640154 KRT27Q7Z3Y8 459 aa17.02■□□□□ 0.32
CGREF1-209ENST00000640154 ARHGEF25Q86VW2 580 aa17.02■□□□□ 0.32
CGREF1-209ENST00000640154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
CGREF1-209ENST00000640154 CCDC125Q86Z20 511 aa17.01■□□□□ 0.31
CGREF1-209ENST00000640154 RGPD5Q99666 1765 aa17.01■□□□□ 0.31
CGREF1-209ENST00000640154 CDCA8Q53HL2 280 aa17■□□□□ 0.31
CGREF1-209ENST00000640154 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
CGREF1-209ENST00000640154 NME9Q86XW9 330 aa17■□□□□ 0.31
CGREF1-209ENST00000640154 ZRANB1Q9UGI0 708 aa17■□□□□ 0.31
CGREF1-209ENST00000640154 ABCC6O95255 1503 aa17■□□□□ 0.31
CGREF1-209ENST00000640154 BARGINQ6ZT62 677 aa16.99■□□□□ 0.31
CGREF1-209ENST00000640154 ANKRD36BQ8N2N9 1353 aa16.99■□□□□ 0.31
CGREF1-209ENST00000640154 OVOS2A0A0J9YW53 1432 aa16.98■□□□□ 0.31
CGREF1-209ENST00000640154 OVOS2Q6IE36 1432 aa16.98■□□□□ 0.31
CGREF1-209ENST00000640154 A0A0G2JS52 829 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms