RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 MAMSTRQ6ZN01 415 aa7.46□□□□□ -1.22
NECAP1-222ENST00000640072 ZC3H15Q8WU90 426 aaKnown RBP7.46□□□□□ -1.22
NECAP1-222ENST00000640072 MKL1Q969V6 931 aa7.46□□□□□ -1.22
NECAP1-222ENST00000640072 CFAP53Q96M91 514 aa7.46□□□□□ -1.22
NECAP1-222ENST00000640072 DRC1Q96MC2 740 aa7.46□□□□□ -1.22
NECAP1-222ENST00000640072 FSD2A1L4K1 749 aa7.46□□□□□ -1.22
NECAP1-222ENST00000640072 CCDC173Q0VFZ6 552 aa7.46□□□□□ -1.22
NECAP1-222ENST00000640072 CEP126Q9P2H0 1117 aa7.46□□□□□ -1.22
NECAP1-222ENST00000640072 EXOC5O00471 708 aa7.45□□□□□ -1.22
NECAP1-222ENST00000640072 TRAK2O60296 914 aa7.45□□□□□ -1.22
NECAP1-222ENST00000640072 PARNO95453 639 aaKnown RBP7.45□□□□□ -1.22
NECAP1-222ENST00000640072 BDNFP23560 247 aa7.45□□□□□ -1.22
NECAP1-222ENST00000640072 ZC3H12AQ5D1E8 599 aaKnown RBP7.45□□□□□ -1.22
NECAP1-222ENST00000640072 MRS2Q9HD23 443 aa7.45□□□□□ -1.22
NECAP1-222ENST00000640072 MCCD1P59942 119 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-222ENST00000640072 XPCQ01831 940 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-222ENST00000640072 C16orf87Q6PH81 154 aa7.45□□□□□ -1.22
NECAP1-222ENST00000640072 PDILTQ8N807 584 aa7.45□□□□□ -1.22
NECAP1-222ENST00000640072 APLP1P51693 650 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 C1QTNF12Q5T7M4 302 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 COMMD10Q9Y6G5 202 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 CCDC189A1A4V9 331 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 ABCD1P33897 745 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.44□□□□□ -1.22
NECAP1-222ENST00000640072 SMC5Q8IY18 1101 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 CDCA7Q9BWT1 371 aaPredicted RBP7.44□□□□□ -1.22
NECAP1-222ENST00000640072 PDZRN3Q9UPQ7 1066 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 UVSSAQ2YD98 709 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 BARGINQ6ZT62 677 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 AMOTL1Q8IY63 956 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 LRRC27Q9C0I9 530 aa7.44□□□□□ -1.22
NECAP1-222ENST00000640072 FBXO9Q9UK97 447 aaPredicted RBP7.44□□□□□ -1.22
NECAP1-222ENST00000640072 COPB2P35606 906 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 E2F5Q15329 346 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 C11orf96Q7Z7L8 435 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 H0YHG0 523 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 CTAGE5O15320 804 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 RBM5P52756 815 aaKnown RBP eCLIP7.43□□□□□ -1.22
NECAP1-222ENST00000640072 SARNPP82979 210 aaKnown RBP7.43□□□□□ -1.22
NECAP1-222ENST00000640072 PDCL2Q8N4E4 241 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
NECAP1-222ENST00000640072 ZBED9Q6R2W3 1325 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 CASQ1P31415 396 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 HS6ST3Q8IZP7 471 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 CACTIN-AS1Q8N1I8 211 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 GPATCH3Q96I76 525 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 CXorf56Q9H5V9 222 aa7.43□□□□□ -1.22
NECAP1-222ENST00000640072 GOLGA6L6A8MZA4 724 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 MICALL1Q8N3F8 863 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 MNS1Q8NEH6 495 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 SREK1Q8WXA9 508 aaKnown RBP7.42□□□□□ -1.22
NECAP1-222ENST00000640072 ARPC5LQ9BPX5 153 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 MAF1Q9H063 256 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 RMI1Q9H9A7 625 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 TOMM22Q9NS69 142 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 GNL3LQ9NVN8 582 aaKnown RBP7.42□□□□□ -1.22
NECAP1-222ENST00000640072 CAPN2P17655 700 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 FAM161AQ3B820 660 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 C1orf131Q8NDD1 294 aaKnown RBP7.42□□□□□ -1.22
NECAP1-222ENST00000640072 FLT3P36888 993 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 KIAA2012Q0VF49 1180 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 TTC30AQ86WT1 665 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 TMX1Q9H3N1 280 aa7.42□□□□□ -1.22
NECAP1-222ENST00000640072 DIS3Q9Y2L1 958 aaKnown RBP7.42□□□□□ -1.22
NECAP1-222ENST00000640072 U2SURPO15042 1029 aaKnown RBP7.41□□□□□ -1.22
NECAP1-222ENST00000640072 MCM4P33991 863 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 CTR9Q6PD62 1173 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 NOL10Q9BSC4 688 aaKnown RBP7.41□□□□□ -1.22
NECAP1-222ENST00000640072 IRF2BPLQ9H1B7 796 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 SYNPO2Q9UMS6 1093 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 NUDCQ9Y266 331 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 AMOTL2Q9Y2J4 779 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 CCDC194A0A1B0GVG4 234 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 CCP110O43303 1012 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 COQ9O75208 318 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 NAT2P11245 290 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 NASPP49321 788 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-222ENST00000640072 SKAP1Q86WV1 359 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 C22orf23Q9BZE7 217 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 GOPCQ9HD26 462 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 RSPH14Q9UHP6 348 aa7.41□□□□□ -1.22
NECAP1-222ENST00000640072 KIF1CO43896 1103 aaKnown RBP7.4□□□□□ -1.22
NECAP1-222ENST00000640072 CCDC70Q6NSX1 233 aa7.4□□□□□ -1.22
NECAP1-222ENST00000640072 CC2D1AQ6P1N0 951 aaPredicted RBP7.4□□□□□ -1.22
NECAP1-222ENST00000640072 OGFOD1Q8N543 542 aa7.4□□□□□ -1.22
NECAP1-222ENST00000640072 RANBP17Q9H2T7 1088 aaKnown RBP7.4□□□□□ -1.22
NECAP1-222ENST00000640072 DONSONQ9NYP3 566 aa7.4□□□□□ -1.22
NECAP1-222ENST00000640072 DHX57Q6P158 1386 aaKnown RBP7.4□□□□□ -1.22
NECAP1-222ENST00000640072 GOLGA6L22H0YM25 854 aa7.4□□□□□ -1.22
NECAP1-222ENST00000640072 IPO5O00410 1097 aaKnown RBP7.4□□□□□ -1.22
NECAP1-222ENST00000640072 GYS2P54840 703 aa7.4□□□□□ -1.22
NECAP1-222ENST00000640072 ICE2Q659A1 982 aa7.4□□□□□ -1.22
NECAP1-222ENST00000640072 EXOC6Q8TAG9 804 aa7.4□□□□□ -1.22
NECAP1-222ENST00000640072 DDX49Q9Y6V7 483 aaKnown RBP7.4□□□□□ -1.22
NECAP1-222ENST00000640072 PPP1R12AO14974 1030 aaPredicted RBP7.4□□□□□ -1.23
NECAP1-222ENST00000640072 MECOMQ03112 1051 aa7.4□□□□□ -1.23
NECAP1-222ENST00000640072 ATP2B3Q16720 1220 aa7.4□□□□□ -1.23
NECAP1-222ENST00000640072 MAP3K20Q9NYL2 800 aaKnown RBP7.4□□□□□ -1.23
NECAP1-222ENST00000640072 NRBP1Q9UHY1 535 aa7.4□□□□□ -1.23
NECAP1-222ENST00000640072 CARNS1A5YM72 827 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms