RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 ANKRD26Q9UPS8 1709 aa28.43■■■□□ 2.14
SCARB2-219ENST00000639738 CGNL1Q0VF96 1302 aa28.43■■■□□ 2.14
SCARB2-219ENST00000639738 FYB1O15117 783 aa28.43■■■□□ 2.14
SCARB2-219ENST00000639738 NGDNQ8NEJ9 315 aaKnown RBP28.43■■■□□ 2.14
SCARB2-219ENST00000639738 SLAIN2Q9P270 581 aa28.41■■■□□ 2.14
SCARB2-219ENST00000639738 TTC21BQ7Z4L5 1316 aa28.41■■■□□ 2.14
SCARB2-219ENST00000639738 NSD2O96028 1365 aa28.41■■■□□ 2.14
SCARB2-219ENST00000639738 RALBP1Q15311 655 aa28.4■■■□□ 2.14
SCARB2-219ENST00000639738 MED1Q15648 1581 aaPredicted RBP28.4■■■□□ 2.14
SCARB2-219ENST00000639738 TRPM3Q9HCF6 1732 aaPredicted RBP28.38■■■□□ 2.13
SCARB2-219ENST00000639738 CNGB1Q14028 1251 aaPredicted RBP28.38■■■□□ 2.13
SCARB2-219ENST00000639738 BRD4O60885 1362 aaPredicted RBP28.37■■■□□ 2.13
SCARB2-219ENST00000639738 BRINP3Q76B58 766 aa28.36■■■□□ 2.13
SCARB2-219ENST00000639738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.36■■■□□ 2.13
SCARB2-219ENST00000639738 PIK3C2AO00443 1686 aa28.35■■■□□ 2.13
SCARB2-219ENST00000639738 FOXO3O43524 673 aa28.34■■■□□ 2.13
SCARB2-219ENST00000639738 NME9Q86XW9 330 aa28.34■■■□□ 2.13
SCARB2-219ENST00000639738 TTC21AQ8NDW8 1320 aa28.34■■■□□ 2.13
SCARB2-219ENST00000639738 CCER2I3L3R5 266 aa28.33■■■□□ 2.13
SCARB2-219ENST00000639738 GGNBP2Q9H3C7 697 aa28.33■■■□□ 2.13
SCARB2-219ENST00000639738 MARF1Q9Y4F3 1742 aaKnown RBP28.33■■■□□ 2.13
SCARB2-219ENST00000639738 USP54Q70EL1 1684 aa28.33■■■□□ 2.13
SCARB2-219ENST00000639738 ZRANB1Q9UGI0 708 aa28.33■■■□□ 2.13
SCARB2-219ENST00000639738 MYBBP1AQ9BQG0 1328 aaKnown RBP28.31■■■□□ 2.12
SCARB2-219ENST00000639738 PXDNQ92626 1479 aa28.3■■■□□ 2.12
SCARB2-219ENST00000639738 CCDC184Q52MB2 194 aa28.3■■■□□ 2.12
SCARB2-219ENST00000639738 USP31Q70CQ4 1352 aa28.3■■■□□ 2.12
SCARB2-219ENST00000639738 PSME1Q06323 249 aa28.29■■■□□ 2.12
SCARB2-219ENST00000639738 OVOS2A0A0J9YW53 1432 aa28.29■■■□□ 2.12
SCARB2-219ENST00000639738 OVOS2Q6IE36 1432 aa28.29■■■□□ 2.12
SCARB2-219ENST00000639738 ROBO1Q9Y6N7 1651 aa28.29■■■□□ 2.12
SCARB2-219ENST00000639738 NHSL1Q5SYE7 1610 aa28.29■■■□□ 2.12
SCARB2-219ENST00000639738 PPP2R1AP30153 589 aa28.28■■■□□ 2.12
SCARB2-219ENST00000639738 KRT28Q7Z3Y7 464 aa28.28■■■□□ 2.12
SCARB2-219ENST00000639738 MORC1Q86VD1 984 aa28.28■■■□□ 2.12
SCARB2-219ENST00000639738 DDX17Q92841 729 aaKnown RBP28.28■■■□□ 2.12
SCARB2-219ENST00000639738 ALS2Q96Q42 1657 aa28.27■■■□□ 2.12
SCARB2-219ENST00000639738 XPCQ01831 940 aaPredicted RBP28.25■■■□□ 2.11
SCARB2-219ENST00000639738 NPHP3Q7Z494 1330 aa28.25■■■□□ 2.11
SCARB2-219ENST00000639738 SOCS7O14512 581 aa28.23■■■□□ 2.11
SCARB2-219ENST00000639738 SBNO1A3KN83 1393 aa28.23■■■□□ 2.11
SCARB2-219ENST00000639738 NLRP13Q86W25 1043 aa28.22■■■□□ 2.11
SCARB2-219ENST00000639738 SOS2Q07890 1332 aaPredicted RBP28.21■■■□□ 2.11
SCARB2-219ENST00000639738 COG3Q96JB2 828 aa28.2■■■□□ 2.1
SCARB2-219ENST00000639738 MAP2P11137 1827 aaKnown RBP28.18■■■□□ 2.1
SCARB2-219ENST00000639738 AHDC1Q5TGY3 1603 aaPredicted RBP28.18■■■□□ 2.1
SCARB2-219ENST00000639738 PAK3O75914 559 aaPredicted RBP28.18■■■□□ 2.1
SCARB2-219ENST00000639738 ABTB2Q8N961 1025 aa28.18■■■□□ 2.1
SCARB2-219ENST00000639738 AATKQ6ZMQ8 1374 aa28.17■■■□□ 2.1
SCARB2-219ENST00000639738 TNNT2P45379 298 aaPredicted RBP28.17■■■□□ 2.1
SCARB2-219ENST00000639738 FBLN1P23142 703 aa28.15■■■□□ 2.1
SCARB2-219ENST00000639738 NLRP6P59044 892 aa28.15■■■□□ 2.1
SCARB2-219ENST00000639738 SPATA31A3Q5VYP0 1347 aa28.15■■■□□ 2.1
SCARB2-219ENST00000639738 TNS3Q68CZ2 1445 aa28.14■■■□□ 2.1
SCARB2-219ENST00000639738 NUTM2GQ5VZR2 741 aa28.13■■■□□ 2.09
SCARB2-219ENST00000639738 SLIT3O75094 1523 aa28.13■■■□□ 2.09
SCARB2-219ENST00000639738 SMG6Q86US8 1419 aaKnown RBP28.13■■■□□ 2.09
SCARB2-219ENST00000639738 MRS2Q9HD23 443 aa28.13■■■□□ 2.09
SCARB2-219ENST00000639738 PHLPP1O60346 1717 aa28.12■■■□□ 2.09
SCARB2-219ENST00000639738 CRYBG1Q9Y4K1 1723 aa28.12■■■□□ 2.09
SCARB2-219ENST00000639738 USP19O94966 1318 aa28.12■■■□□ 2.09
SCARB2-219ENST00000639738 POLKQ9UBT6 870 aa28.12■■■□□ 2.09
SCARB2-219ENST00000639738 MTHFSP49914 203 aa28.11■■■□□ 2.09
SCARB2-219ENST00000639738 PHF23Q9BUL5 403 aaPredicted RBP28.1■■■□□ 2.09
SCARB2-219ENST00000639738 NFAT5O94916 1531 aa28.1■■■□□ 2.09
SCARB2-219ENST00000639738 PNISRQ8TF01 805 aaKnown RBP28.08■■■□□ 2.09
SCARB2-219ENST00000639738 PNPLA6Q8IY17 1366 aa28.08■■■□□ 2.09
SCARB2-219ENST00000639738 INSRP06213 1382 aa28.07■■■□□ 2.08
SCARB2-219ENST00000639738 COL3A1P02461 1466 aaPredicted RBP28.07■■■□□ 2.08
SCARB2-219ENST00000639738 PEAK1Q9H792 1746 aa28.07■■■□□ 2.08
SCARB2-219ENST00000639738 SHPRHQ149N8 1683 aa28.05■■■□□ 2.08
SCARB2-219ENST00000639738 COL16A1Q07092 1604 aaPredicted RBP28.05■■■□□ 2.08
SCARB2-219ENST00000639738 PHRF1Q9P1Y6 1649 aaKnown RBP28.05■■■□□ 2.08
SCARB2-219ENST00000639738 ARHGEF10O15013 1369 aa28.05■■■□□ 2.08
SCARB2-219ENST00000639738 EMILIN1Q9Y6C2 1016 aa28.04■■■□□ 2.08
SCARB2-219ENST00000639738 RRS1Q15050 365 aaKnown RBP28.03■■■□□ 2.08
SCARB2-219ENST00000639738 LMOD2Q6P5Q4 547 aa28.02■■■□□ 2.08
SCARB2-219ENST00000639738 CDK12Q9NYV4 1490 aaPredicted RBP28.01■■■□□ 2.07
SCARB2-219ENST00000639738 LTN1O94822 1766 aa28■■■□□ 2.07
SCARB2-219ENST00000639738 GCP02774 474 aa28■■■□□ 2.07
SCARB2-219ENST00000639738 ABCA3Q99758 1704 aa28■■■□□ 2.07
SCARB2-219ENST00000639738 MAP3K19Q56UN5 1328 aa28■■■□□ 2.07
SCARB2-219ENST00000639738 KCNH5Q8NCM2 988 aa27.98■■■□□ 2.07
SCARB2-219ENST00000639738 COL22A1Q8NFW1 1626 aaPredicted RBP27.98■■■□□ 2.07
SCARB2-219ENST00000639738 SOX12O15370 315 aa27.97■■■□□ 2.07
SCARB2-219ENST00000639738 LRRC59Q96AG4 307 aaKnown RBP27.96■■■□□ 2.07
SCARB2-219ENST00000639738 KIF24Q5T7B8 1368 aa27.96■■■□□ 2.07
SCARB2-219ENST00000639738 CABLES1Q8TDN4 633 aa27.95■■■□□ 2.06
SCARB2-219ENST00000639738 ARHGEF25Q86VW2 580 aa27.94■■■□□ 2.06
SCARB2-219ENST00000639738 CFAP53Q96M91 514 aa27.93■■■□□ 2.06
SCARB2-219ENST00000639738 FAM9BQ8IZU0 186 aa27.92■■■□□ 2.06
SCARB2-219ENST00000639738 COL18A1P39060 1754 aa27.92■■■□□ 2.06
SCARB2-219ENST00000639738 JCADQ9P266 1359 aa27.92■■■□□ 2.06
SCARB2-219ENST00000639738 PPM1GO15355 546 aaPredicted RBP27.91■■■□□ 2.06
SCARB2-219ENST00000639738 FLT4P35916 1363 aa27.9■■■□□ 2.06
SCARB2-219ENST00000639738 RGS17Q9UGC6 210 aaPredicted RBP27.9■■■□□ 2.06
SCARB2-219ENST00000639738 RTL1A6NKG5 1358 aa27.89■■■□□ 2.06
SCARB2-219ENST00000639738 IL13P35225 146 aa27.89■■■□□ 2.06
SCARB2-219ENST00000639738 HSP90AB2PQ58FF8 381 aa27.89■■■□□ 2.06
SCARB2-219ENST00000639738 ADAMTS8Q9UP79 889 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms